Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:110506439-110696450

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp2r5c 12 110447179 to 110583075 135896 + protein coding gene protein phosphatase 2, regulatory subunit B', gamma
Tssr115217 12 110516208 to 110516213 5 + TSS region transcription start site region 115217
Cpgi5118 12 110590890 to 110592190 1300 CpG island CpG island 5118
B930059L03Rik 12 110591374 to 110592679 1305 + lincRNA gene RIKEN cDNA B930059L03 gene
Tssr117782 12 110591586 to 110591608 22 - TSS region transcription start site region 117782
Tssr115218 12 110591733 to 110591791 58 + TSS region transcription start site region 115218
Gm35558 12 110596608 to 110601372 4764 - lincRNA gene predicted gene, 35558
Cpgi5119 12 110601194 to 110602226 1032 CpG island CpG island 5119
Tssr115219 12 110601386 to 110601397 11 + TSS region transcription start site region 115219
Tssr115220 12 110601439 to 110601450 11 + TSS region transcription start site region 115220
Dync1h1 12 110601452 to 110666945 65493 + protein coding gene dynein cytoplasmic 1 heavy chain 1
Tssr115221 12 110601459 to 110601477 18 + TSS region transcription start site region 115221
Tssr115222 12 110601487 to 110601498 11 + TSS region transcription start site region 115222
Tssr117783 12 110601941 to 110601972 31 - TSS region transcription start site region 117783
Tssr115223 12 110609344 to 110609361 17 + TSS region transcription start site region 115223
Tssr115224 12 110615467 to 110615469 2 + TSS region transcription start site region 115224
Tssr115225 12 110628239 to 110628255 16 + TSS region transcription start site region 115225
Tssr115226 12 110628771 to 110628791 20 + TSS region transcription start site region 115226
Gm17111 12 110664892 to 110665408 516 - antisense lncRNA gene predicted gene 17111
1700001K19Rik 12 110667688 to 110682619 14931 - protein coding gene RIKEN cDNA 1700001K19 gene
Gm27299 12 110674100 to 110674202 102 + miRNA gene predicted gene, 27299
Tssr117784 12 110682557 to 110682564 7 - TSS region transcription start site region 117784
Tssr117785 12 110682606 to 110682623 17 - TSS region transcription start site region 117785
Hsp90aa1 12 110691036 to 110696395 5359 - protein coding gene heat shock protein 90, alpha (cytosolic), class A member 1
Tssr115227 12 110694177 to 110694185 8 + TSS region transcription start site region 115227
Tssr115228 12 110694259 to 110694281 22 + TSS region transcription start site region 115228
Tssr115229 12 110694603 to 110694637 34 + TSS region transcription start site region 115229
Cpgi5120 12 110695659 to 110697141 1482 CpG island CpG island 5120
Tssr117786 12 110695764 to 110695808 44 - TSS region transcription start site region 117786
Tssr117787 12 110695823 to 110695859 36 - TSS region transcription start site region 117787
Tssr117788 12 110695860 to 110695876 16 - TSS region transcription start site region 117788
Tssr115230 12 110695904 to 110695914 10 + TSS region transcription start site region 115230
Tssr115231 12 110695918 to 110695950 32 + TSS region transcription start site region 115231
4932703K07Rik 12 110696003 to 110697115 1112 unclassified gene RIKEN cDNA 4932703K07 gene
Tssr117789 12 110696248 to 110696262 14 - TSS region transcription start site region 117789
Tssr117790 12 110696309 to 110696319 10 - TSS region transcription start site region 117790
Tssr117791 12 110696332 to 110696418 86 - TSS region transcription start site region 117791
Tssr117792 12 110696434 to 110696447 13 - TSS region transcription start site region 117792