Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
B830012L14Rik | 12 | 7001 | + | lincRNA gene | RIKEN cDNA B830012L14 gene | |
Tssr115172 | 12 | 10 | + | TSS region | transcription start site region 115172 | |
Tssr115173 | 12 | 15 | + | TSS region | transcription start site region 115173 | |
Mirc6 | 12 | 20342 | complex/cluster/region | microRNA cluster 6, including Mir379 through Mir544 | ||
Mirc36 | 12 | 38900 | complex/cluster/region | microRNA cluster 36, including Mir379 through Mir3072 | ||
Mir379 | 12 | 65 | + | miRNA gene | microRNA 379 | |
Tssr115174 | 12 | 3 | + | TSS region | transcription start site region 115174 | |
Tssr115175 | 12 | 4 | + | TSS region | transcription start site region 115175 | |
Mir411 | 12 | 81 | + | miRNA gene | microRNA 411 | |
Mir299a | 12 | 62 | + | miRNA gene | microRNA 299a | |
Mir299b | 12 | 48 | - | miRNA gene | microRNA 299b | |
Gm25750 | 12 | 111 | - | miRNA gene | predicted gene, 25750 | |
Mir380 | 12 | 60 | + | miRNA gene | microRNA 380 | |
Mirc44 | 12 | 573 | complex/cluster/region | microRNA cluster 44, including Mir1197 through Mir758 | ||
Mir1197 | 12 | 119 | + | miRNA gene | microRNA 1197 | |
Mir323 | 12 | 85 | + | miRNA gene | microRNA 323 | |
Mir758 | 12 | 80 | + | miRNA gene | microRNA 758 | |
Mir329 | 12 | 96 | + | miRNA gene | microRNA 329 | |
Mir494 | 12 | 84 | + | miRNA gene | microRNA 494 | |
Mir679 | 12 | 73 | + | miRNA gene | microRNA 679 | |
Mir1193 | 12 | 120 | + | miRNA gene | microRNA 1193 | |
Mir666 | 12 | 98 | + | miRNA gene | microRNA 666 | |
Mirc45 | 12 | 248 | complex/cluster/region | microRNA cluster 45, including Mir666 through Mir543 | ||
Mir543 | 12 | 75 | + | miRNA gene | microRNA 543 | |
Mir495 | 12 | 62 | + | miRNA gene | microRNA 495 | |
Tssr115176 | 12 | 3 | + | TSS region | transcription start site region 115176 | |
Mir667 | 12 | 91 | + | miRNA gene | microRNA 667 | |
Tssr115177 | 12 | 4 | + | TSS region | transcription start site region 115177 | |
Mir376c | 12 | 85 | + | miRNA gene | microRNA 376c | |
Mir654 | 12 | 83 | + | miRNA gene | microRNA 654 | |
Tssr3952 | 12 | 4 | + | TSS region | transcription start site region 3952 | |
Mir376b | 12 | 81 | + | miRNA gene | microRNA 376b | |
Gm25252 | 12 | 119 | - | miRNA gene | predicted gene, 25252 | |
Mir376a | 12 | 67 | + | miRNA gene | microRNA 376a | |
Mir300 | 12 | 78 | + | miRNA gene | microRNA 300 | |
Mir381 | 12 | 74 | + | miRNA gene | microRNA 381 | |
Mir487b | 12 | 81 | + | miRNA gene | microRNA 487b | |
Gm44322 | 12 | 114 | - | miRNA gene | predicted gene, 44322 | |
Mir539 | 12 | 73 | + | miRNA gene | microRNA 539 | |
Gm27379 | 12 | 122 | + | miRNA gene | predicted gene, 27379 | |
Mir544 | 12 | 77 | + | miRNA gene | microRNA 544 | |
Mir382 | 12 | 75 | + | miRNA gene | microRNA 382 | |
Mirc7 | 12 | 14189 | complex/cluster/region | microRNA cluster 7, including Mir382 through Mir3072 | ||
Mir134 | 12 | 70 | + | miRNA gene | microRNA 134 | |
Mir668 | 12 | 65 | + | miRNA gene | microRNA 668 | |
Mir485 | 12 | 72 | + | miRNA gene | microRNA 485 | |
Tssr115178 | 12 | 4 | + | TSS region | transcription start site region 115178 | |
Mirg | 12 | 14477 | + | lincRNA gene | miRNA containing gene | |
Mir453 | 12 | 81 | + | miRNA gene | microRNA 453 | |
Tssr115179 | 12 | 4 | + | TSS region | transcription start site region 115179 | |
Tssr115180 | 12 | 4 | + | TSS region | transcription start site region 115180 | |
Mir154 | 12 | 65 | + | miRNA gene | microRNA 154 | |
Tssr115181 | 12 | 14 | + | TSS region | transcription start site region 115181 | |
Tssr115182 | 12 | 15 | + | TSS region | transcription start site region 115182 | |
Mir496a | 12 | 78 | + | miRNA gene | microRNA 496a | |
Mir377 | 12 | 67 | + | miRNA gene | microRNA 377 | |
Tssr117762 | 12 | 3 | - | TSS region | transcription start site region 117762 | |
Tssr115183 | 12 | 5 | + | TSS region | transcription start site region 115183 | |
Mir541 | 12 | 89 | + | miRNA gene | microRNA 541 | |
Mirc46 | 12 | 637 | complex/cluster/region | microRNA cluster 46, including Mir409 through Mir410 | ||
Gm24321 | 12 | 79 | - | miRNA gene | predicted gene, 24321 | |
Mir409 | 12 | 78 | + | miRNA gene | microRNA 409 | |
Mir412 | 12 | 79 | + | miRNA gene | microRNA 412 | |
Mir369 | 12 | 78 | + | miRNA gene | microRNA 369 | |
Mir410 | 12 | 80 | + | miRNA gene | microRNA 410 | |
Tssr115184 | 12 | 2 | + | TSS region | transcription start site region 115184 | |
Mir3072 | 12 | 82 | + | miRNA gene | microRNA 3072 | |
Tssr115185 | 12 | 18 | + | TSS region | transcription start site region 115185 | |
Tssr115186 | 12 | 20 | + | TSS region | transcription start site region 115186 | |
Tssr115187 | 12 | 23 | + | TSS region | transcription start site region 115187 | |
Tssr115188 | 12 | 9 | + | TSS region | transcription start site region 115188 | |
Nrq10 | 12 | 254 | QTL | noise-induced hearing loss resistant QTL 10 | ||
D12Mit16 | 12 | 254 | DNA segment | DNA segment, Chr 12, Massachusetts Institute of Technology 16 | ||
Nrq10a | 12 | 254 | QTL | noise-induced hearing loss resistant QTL 10a | ||
Igan4 | 12 | 9277623 | QTL | IgA nephropathy 4 | ||
D12Mit16.1 | 12 | 120 | DNA segment | DNA segment, Chr 12, Massachusetts Institute of Technology 16.1 | ||
Gm9661 | 12 | 1121 | + | pseudogene | predicted gene 9661 | |
Tssr115189 | 12 | 1 | + | TSS region | transcription start site region 115189 | |
Tssr115190 | 12 | 3 | + | TSS region | transcription start site region 115190 | |
Gm3379 | 12 | 641 | - | pseudogene | predicted gene 3379 | |
Tssr117763 | 12 | 1 | - | TSS region | transcription start site region 117763 | |
4930511J24Rik | 12 | 1733 | + | lincRNA gene | RIKEN cDNA 4930511J24 gene | |
Gm34554 | 12 | 25577 | + | lncRNA gene | predicted gene, 34554 | |
Tssr115191 | 12 | 27 | + | TSS region | transcription start site region 115191 | |
Tssr115192 | 12 | 17 | + | TSS region | transcription start site region 115192 | |
Tssr117764 | 12 | 39 | - | TSS region | transcription start site region 117764 | |
Tssr115193 | 12 | 12 | + | TSS region | transcription start site region 115193 | |
Tssr115194 | 12 | 11 | + | TSS region | transcription start site region 115194 | |
Tssr117765 | 12 | 48 | - | TSS region | transcription start site region 117765 | |
Scrd2 | 12 | 3392099 | heritable phenotypic marker | smallest common region of deletion 2 | ||
D12Mit79 | 12 | 146 | DNA segment | DNA segment, Chr 12, Massachusetts Institute of Technology 79 | ||
Vtbt14 | 12 | 146 | QTL | vertebral trabecular bone trait 14 | ||
Tbqt3 | 12 | -74734312 | QTL | tibia bone quality traits 3 | ||
Cpgi5108 | 12 | 193 | CpG island | CpG island 5108 | ||
Gm34667 | 12 | 31233 | - | lincRNA gene | predicted gene, 34667 | |
Tssr117766 | 12 | 17 | - | TSS region | transcription start site region 117766 | |
Tssr117767 | 12 | 8 | - | TSS region | transcription start site region 117767 | |
Tssr117768 | 12 | 27 | - | TSS region | transcription start site region 117768 | |
Tssr117769 | 12 | 32 | - | TSS region | transcription start site region 117769 | |
Gm40574 | 12 | 11939 | + | lncRNA gene | predicted gene, 40574 | |
Gm34719 | 12 | 39737 | - | lincRNA gene | predicted gene, 34719 | |
Gm47187 | 12 | 228 | + | pseudogene | predicted gene, 47187 | |
D12Mit262 | 12 | 121 | DNA segment | DNA Segment, Chr 12, Massachusetts Institute of Technology 262 | ||
Gm47188 | 12 | 1360 | + | unclassified gene | predicted gene, 47188 | |
Tssr117770 | 12 | 16 | - | TSS region | transcription start site region 117770 | |
Tssr117771 | 12 | 44 | - | TSS region | transcription start site region 117771 | |
Tssr3953 | 12 | 1 | + | TSS region | transcription start site region 3953 | |
3110009F21Rik | 12 | 6419 | - | lincRNA gene | RIKEN cDNA 3110009F21 gene | |
Gm34785 | 12 | 5688 | - | lincRNA gene | predicted gene, 34785 | |
Cpgi5109 | 12 | 2313 | CpG island | CpG island 5109 | ||
Gm40575 | 12 | 7125 | + | lncRNA gene | predicted gene, 40575 | |
Gm34895 | 12 | 6574 | - | lncRNA gene | predicted gene, 34895 | |
Gm40576 | 12 | 10847 | - | lincRNA gene | predicted gene, 40576 | |
4930425K24Rik | 12 | 2142 | + | unclassified gene | RIKEN cDNA 4930425K24 gene | |
Dio3os | 12 | 2684 | - | bidirectional promoter lncRNA gene | deiodinase, iodothyronine type III, opposite strand | |
Cpgi5110 | 12 | 3636 | CpG island | CpG island 5110 | ||
Mir1247 | 12 | 81 | - | miRNA gene | microRNA 1247 | |
Tssr117772 | 12 | 24 | - | TSS region | transcription start site region 117772 | |
Tssr117773 | 12 | 33 | - | TSS region | transcription start site region 117773 | |
Tssr115195 | 12 | 3 | + | TSS region | transcription start site region 115195 | |
Dio3 | 12 | 1867 | + | protein coding gene | deiodinase, iodothyronine type III | |
Cpgi5111 | 12 | 155 | CpG island | CpG island 5111 | ||
Abmm | 12 | 112 | QTL | antibody mediated myocarditis | ||
D12Mit133 | 12 | 112 | DNA segment | DNA segment, Chr 12, Massachusetts Institute of Technology 133 | ||
Gm6988 | 12 | 374 | + | pseudogene | predicted gene 6988 | |
Gm9063 | 12 | 581 | - | pseudogene | predicted gene 9063 | |
Cpgi5112 | 12 | 399 | CpG island | CpG island 5112 | ||
Gm47195 | 12 | 336 | + | pseudogene | predicted gene, 47195 | |
Cpgi5113 | 12 | 379 | CpG island | CpG island 5113 | ||
Tssr115196 | 12 | 4 | + | TSS region | transcription start site region 115196 | |
Tssr117774 | 12 | 41 | - | TSS region | transcription start site region 117774 | |
Cpgi5114 | 12 | 223 | CpG island | CpG island 5114 | ||
Gm40577 | 12 | 12463 | - | lncRNA gene | predicted gene, 40577 | |
Cpgi5115 | 12 | 454 | CpG island | CpG island 5115 | ||
Tssr117775 | 12 | 6 | - | TSS region | transcription start site region 117775 | |
Tssr115197 | 12 | 11 | + | TSS region | transcription start site region 115197 | |
Tssr115198 | 12 | 32 | + | TSS region | transcription start site region 115198 | |
Cpgi5116 | 12 | 1503 | CpG island | CpG island 5116 | ||
Tssr115199 | 12 | 35 | + | TSS region | transcription start site region 115199 | |
Tssr115200 | 12 | 37 | + | TSS region | transcription start site region 115200 | |
Ppp2r5c | 12 | 135896 | + | protein coding gene | protein phosphatase 2, regulatory subunit B', gamma | |
Tssr115201 | 12 | 5 | + | TSS region | transcription start site region 115201 | |
Tssr115202 | 12 | 18 | + | TSS region | transcription start site region 115202 | |
Tssr115203 | 12 | 16 | + | TSS region | transcription start site region 115203 | |
Tssr115204 | 12 | 13 | + | TSS region | transcription start site region 115204 | |
Tssr115205 | 12 | 13 | + | TSS region | transcription start site region 115205 | |
Tssr115206 | 12 | 13 | + | TSS region | transcription start site region 115206 | |
9430099N05Rik | 12 | 1562 | unclassified non-coding RNA gene | RIKEN cDNA 9430099N05 gene | ||
Tssr117776 | 12 | 18 | - | TSS region | transcription start site region 117776 | |
Tssr117777 | 12 | 21 | - | TSS region | transcription start site region 117777 | |
Gm19605 | 12 | 11697 | - | lncRNA gene | predicted gene, 19605 | |
Tssr117778 | 12 | 25 | - | TSS region | transcription start site region 117778 | |
Tssr117779 | 12 | 10 | - | TSS region | transcription start site region 117779 | |
Tssr115207 | 12 | 18 | + | TSS region | transcription start site region 115207 | |
Tssr115208 | 12 | 27 | + | TSS region | transcription start site region 115208 | |
Tssr115209 | 12 | 9 | + | TSS region | transcription start site region 115209 | |
Cpgi5117 | 12 | 167 | CpG island | CpG island 5117 | ||
Tssr117780 | 12 | 51 | - | TSS region | transcription start site region 117780 | |
Tssr115210 | 12 | 45 | + | TSS region | transcription start site region 115210 | |
Tssr115211 | 12 | 17 | + | TSS region | transcription start site region 115211 | |
Tssr117781 | 12 | 11 | - | TSS region | transcription start site region 117781 | |
Tssr115212 | 12 | 21 | + | TSS region | transcription start site region 115212 | |
Tssr115213 | 12 | 12 | + | TSS region | transcription start site region 115213 | |
Tssr115214 | 12 | 42 | + | TSS region | transcription start site region 115214 | |
Tssr115215 | 12 | 53 | + | TSS region | transcription start site region 115215 | |
Tssr115216 | 12 | 4 | + | TSS region | transcription start site region 115216 | |
D12Mit141 | 12 | 135 | DNA segment | DNA segment, Chr 12, Massachusetts Institute of Technology 141 | ||
Tssr115217 | 12 | 5 | + | TSS region | transcription start site region 115217 | |
Cpgi5118 | 12 | 1300 | CpG island | CpG island 5118 | ||
B930059L03Rik | 12 | 1305 | + | lincRNA gene | RIKEN cDNA B930059L03 gene | |
Tssr117782 | 12 | 22 | - | TSS region | transcription start site region 117782 | |
Tssr115218 | 12 | 58 | + | TSS region | transcription start site region 115218 | |
Gm35558 | 12 | 4764 | - | lincRNA gene | predicted gene, 35558 | |
Cpgi5119 | 12 | 1032 | CpG island | CpG island 5119 | ||
Tssr115219 | 12 | 11 | + | TSS region | transcription start site region 115219 | |
Tssr115220 | 12 | 11 | + | TSS region | transcription start site region 115220 | |
Dync1h1 | 12 | 65493 | + | protein coding gene | dynein cytoplasmic 1 heavy chain 1 | |
Tssr115221 | 12 | 18 | + | TSS region | transcription start site region 115221 | |
Tssr115222 | 12 | 11 | + | TSS region | transcription start site region 115222 | |
Tssr117783 | 12 | 31 | - | TSS region | transcription start site region 117783 | |
Tssr115223 | 12 | 17 | + | TSS region | transcription start site region 115223 | |
Tssr115224 | 12 | 2 | + | TSS region | transcription start site region 115224 | |
Tssr115225 | 12 | 16 | + | TSS region | transcription start site region 115225 | |
Tssr115226 | 12 | 20 | + | TSS region | transcription start site region 115226 | |
Gm17111 | 12 | 516 | - | antisense lncRNA gene | predicted gene 17111 | |
1700001K19Rik | 12 | 14931 | - | protein coding gene | RIKEN cDNA 1700001K19 gene | |
Gm27299 | 12 | 102 | + | miRNA gene | predicted gene, 27299 | |
Tssr117784 | 12 | 7 | - | TSS region | transcription start site region 117784 | |
Tssr117785 | 12 | 17 | - | TSS region | transcription start site region 117785 | |
Hsp90aa1 | 12 | 5359 | - | protein coding gene | heat shock protein 90, alpha (cytosolic), class A member 1 | |
Tssr115227 | 12 | 8 | + | TSS region | transcription start site region 115227 | |
Tssr115228 | 12 | 22 | + | TSS region | transcription start site region 115228 | |
Tssr115229 | 12 | 34 | + | TSS region | transcription start site region 115229 | |
Cpgi5120 | 12 | 1482 | CpG island | CpG island 5120 | ||
Tssr117786 | 12 | 44 | - | TSS region | transcription start site region 117786 | |
Tssr117787 | 12 | 36 | - | TSS region | transcription start site region 117787 | |
Tssr117788 | 12 | 16 | - | TSS region | transcription start site region 117788 | |
Tssr115230 | 12 | 10 | + | TSS region | transcription start site region 115230 | |
Tssr115231 | 12 | 32 | + | TSS region | transcription start site region 115231 | |
4932703K07Rik | 12 | 1112 | unclassified gene | RIKEN cDNA 4932703K07 gene |