Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:109685586-109712587

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm25854 12 109686798 to 109686869 71 + snoRNA gene predicted gene, 25854
Gm22205 12 109688055 to 109688125 70 + snoRNA gene predicted gene, 22205
Gm25224 12 109689477 to 109689544 67 + snoRNA gene predicted gene, 25224
B830012L14Rik 12 109695586 to 109702587 7001 + lincRNA gene RIKEN cDNA B830012L14 gene
Tssr115171 12 109700088 to 109700093 5 + TSS region transcription start site region 115171
Tssr115172 12 109705787 to 109705797 10 + TSS region transcription start site region 115172
Tssr115173 12 109706797 to 109706812 15 + TSS region transcription start site region 115173
Mirc6 12 109709060 to 109729402 20342 complex/cluster/region microRNA cluster 6, including Mir379 through Mir544
Mir379 12 109709060 to 109709125 65 + miRNA gene microRNA 379
Mirc36 12 109709060 to 109747960 38900 complex/cluster/region microRNA cluster 36, including Mir379 through Mir3072
Tssr115174 12 109709123 to 109709126 3 + TSS region transcription start site region 115174
Tssr115175 12 109709606 to 109709610 4 + TSS region transcription start site region 115175
Mir411 12 109710175 to 109710256 81 + miRNA gene microRNA 411
Mir299a 12 109710638 to 109710700 62 + miRNA gene microRNA 299a
Mir299b 12 109710645 to 109710693 48 - miRNA gene microRNA 299b
Gm25750 12 109711779 to 109711890 111 - miRNA gene predicted gene, 25750
Mir380 12 109711803 to 109711863 60 + miRNA gene microRNA 380
Mirc44 12 109712317 to 109712890 573 complex/cluster/region microRNA cluster 44, including Mir1197 through Mir758
Mir1197 12 109712317 to 109712436 119 + miRNA gene microRNA 1197
Mir323 12 109712508 to 109712593 85 + miRNA gene microRNA 323