Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:109649945-109710013

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rian 12 109603945 to 109661716 57771 + lncRNA gene RNA imprinted and accumulated in nucleus
Tssr115167 12 109650156 to 109650161 5 + TSS region transcription start site region 115167
Tssr115168 12 109650661 to 109650675 14 + TSS region transcription start site region 115168
AF357359 12 109650709 to 109650738 29 + snoRNA gene snoRNA AF357359
Tssr115169 12 109650977 to 109650997 20 + TSS region transcription start site region 115169
DQ267101 12 109651424 to 109651495 71 + snoRNA gene snoRNA DQ267101
Gm23508 12 109653033 to 109653104 71 + snoRNA gene predicted gene, 23508
Gm26922 12 109654627 to 109654698 71 + snoRNA gene predicted gene, 26922
AF357355 12 109654627 to 109654697 70 + snoRNA gene snoRNA AF357355
DQ267102 12 109656345 to 109656415 70 + snoRNA gene snoRNA DQ267102
Gm25357 12 109657125 to 109657196 71 + snoRNA gene predicted gene, 25357
Gm27604 12 109658407 to 109658478 71 + snoRNA gene predicted gene, 27604
Gm37899 12 109668869 to 109677585 8716 + unclassified gene predicted gene, 37899
Tssr115170 12 109673365 to 109673369 4 + TSS region transcription start site region 115170
Gm23347 12 109673913 to 109673994 81 + snoRNA gene predicted gene, 23347
Tssr117761 12 109675920 to 109675945 25 - TSS region transcription start site region 117761
AF357428 12 109679945 to 109680013 68 + snoRNA gene snoRNA AF357428
Gm23736 12 109680800 to 109680874 74 + snoRNA gene predicted gene, 23736
AF357341 12 109681519 to 109681593 74 + snoRNA gene snoRNA AF357341
Mir882 12 109682197 to 109682273 76 + miRNA gene microRNA 882
Gm22981 12 109682384 to 109682458 74 + snoRNA gene predicted gene, 22981
Gm25856 12 109682994 to 109683068 74 + snoRNA gene predicted gene, 25856
Gm23787 12 109684962 to 109685034 72 + snoRNA gene predicted gene, 23787
Gm25854 12 109686798 to 109686869 71 + snoRNA gene predicted gene, 25854
Gm22205 12 109688055 to 109688125 70 + snoRNA gene predicted gene, 22205
Gm25224 12 109689477 to 109689544 67 + snoRNA gene predicted gene, 25224
B830012L14Rik 12 109695586 to 109702587 7001 + lincRNA gene RIKEN cDNA B830012L14 gene
Tssr115171 12 109700088 to 109700093 5 + TSS region transcription start site region 115171
Tssr115172 12 109705787 to 109705797 10 + TSS region transcription start site region 115172
Tssr115173 12 109706797 to 109706812 15 + TSS region transcription start site region 115173
Mir379 12 109709060 to 109709125 65 + miRNA gene microRNA 379
Mirc36 12 109709060 to 109747960 38900 complex/cluster/region microRNA cluster 36, including Mir379 through Mir3072
Mirc6 12 109709060 to 109729402 20342 complex/cluster/region microRNA cluster 6, including Mir379 through Mir544
Tssr115174 12 109709123 to 109709126 3 + TSS region transcription start site region 115174
Tssr115175 12 109709606 to 109709610 4 + TSS region transcription start site region 115175