Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:109595588-109635599

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mirc43 12 109586314 to 109611941 25627 complex/cluster/region microRNA cluster 43, including Mir341 through Mir1188
1110006E14Rik 12 109595804 to 109598538 2734 unclassified non-coding RNA gene RIKEN cDNA 1110006E14 gene
Tssr117754 12 109597093 to 109597097 4 - TSS region transcription start site region 117754
Tssr115136 12 109597486 to 109597496 10 + TSS region transcription start site region 115136
Tssr117755 12 109598536 to 109598541 5 - TSS region transcription start site region 117755
Tssr115137 12 109599280 to 109599284 4 + TSS region transcription start site region 115137
Tssr117756 12 109600328 to 109600348 20 - TSS region transcription start site region 117756
Tssr115138 12 109600819 to 109600824 5 + TSS region transcription start site region 115138
Tssr115139 12 109603013 to 109603024 11 + TSS region transcription start site region 115139
Tssr115140 12 109603038 to 109603067 29 + TSS region transcription start site region 115140
Gm27350 12 109603882 to 109603979 97 + unclassified non-coding RNA gene predicted gene, 27350
Tssr115141 12 109603915 to 109603920 5 + TSS region transcription start site region 115141
Rian 12 109603945 to 109661716 57771 + lncRNA gene RNA imprinted and accumulated in nucleus
Tssr117757 12 109604415 to 109604420 5 - TSS region transcription start site region 117757
Tssr115142 12 109605026 to 109605029 3 + TSS region transcription start site region 115142
Tssr115143 12 109606787 to 109606791 4 + TSS region transcription start site region 115143
Tssr115144 12 109607798 to 109607802 4 + TSS region transcription start site region 115144
Tssr115145 12 109608773 to 109608793 20 + TSS region transcription start site region 115145
Tssr115146 12 109608868 to 109608882 14 + TSS region transcription start site region 115146
Tssr115147 12 109609696 to 109609700 4 + TSS region transcription start site region 115147
Mir341 12 109611500 to 109611595 95 + miRNA gene microRNA 341
Mir1188 12 109611822 to 109611941 119 + miRNA gene microRNA 1188
Tssr117758 12 109615510 to 109615526 16 - TSS region transcription start site region 117758
Tssr117759 12 109615562 to 109615573 11 - TSS region transcription start site region 117759
Tssr117760 12 109615588 to 109615599 11 - TSS region transcription start site region 117760
Tssr115148 12 109615770 to 109615772 2 + TSS region transcription start site region 115148
Tssr115149 12 109617935 to 109617939 4 + TSS region transcription start site region 115149
Gm23912 12 109618114 to 109618200 86 + miRNA gene predicted gene, 23912
Mir370 12 109618258 to 109618336 78 + miRNA gene microRNA 370
Tssr115150 12 109629072 to 109629083 11 + TSS region transcription start site region 115150
Tssr115151 12 109630093 to 109630106 13 + TSS region transcription start site region 115151
Gm24564 12 109631074 to 109631148 74 + snoRNA gene predicted gene, 24564
Tssr115152 12 109631925 to 109631928 3 + TSS region transcription start site region 115152
Tssr115153 12 109633208 to 109633212 4 + TSS region transcription start site region 115153
Gm23474 12 109633768 to 109633842 74 + snoRNA gene predicted gene, 23474