Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:109453183-109567772

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115 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5104 12 109452763 to 109453973 1210 CpG island CpG island 5104
Dlk1 12 109452823 to 109463336 10513 + protein coding gene delta like non-canonical Notch ligand 1
Tssr115040 12 109453194 to 109453212 18 + TSS region transcription start site region 115040
Tssr115041 12 109453215 to 109453271 56 + TSS region transcription start site region 115041
Tssr115042 12 109453277 to 109453314 37 + TSS region transcription start site region 115042
Tssr115043 12 109453483 to 109453497 14 + TSS region transcription start site region 115043
Tssr3943 12 109453528 to 109453541 13 + TSS region transcription start site region 3943
Tssr3944 12 109453556 to 109453563 7 + TSS region transcription start site region 3944
Tssr3945 12 109453603 to 109453616 13 + TSS region transcription start site region 3945
Tssr3946 12 109453626 to 109453631 5 + TSS region transcription start site region 3946
Tssr3947 12 109453636 to 109453643 7 + TSS region transcription start site region 3947
Tssr3948 12 109453649 to 109453657 8 + TSS region transcription start site region 3948
Tssr115044 12 109454985 to 109454991 6 + TSS region transcription start site region 115044
Tssr115045 12 109457009 to 109457012 3 + TSS region transcription start site region 115045
Tssr115046 12 109458068 to 109458104 36 + TSS region transcription start site region 115046
Tssr117744 12 109458116 to 109458141 25 - TSS region transcription start site region 117744
Cpgi5105 12 109459518 to 109460132 614 CpG island CpG island 5105
Tssr115047 12 109459638 to 109459684 46 + TSS region transcription start site region 115047
Tssr115048 12 109459686 to 109459739 53 + TSS region transcription start site region 115048
Tssr115049 12 109459770 to 109459784 14 + TSS region transcription start site region 115049
Tssr115050 12 109459863 to 109459876 13 + TSS region transcription start site region 115050
Tssr115051 12 109459950 to 109459962 12 + TSS region transcription start site region 115051
Tssr115052 12 109459967 to 109459980 13 + TSS region transcription start site region 115052
Tssr115053 12 109459985 to 109460030 45 + TSS region transcription start site region 115053
Tssr3949 12 109460082 to 109460105 23 + TSS region transcription start site region 3949
Tssr117745 12 109460354 to 109460386 32 - TSS region transcription start site region 117745
Tssr115054 12 109460528 to 109460584 56 + TSS region transcription start site region 115054
Tssr115055 12 109462569 to 109462571 2 + TSS region transcription start site region 115055
Gm34081 12 109493529 to 109516740 23211 - lincRNA gene predicted gene, 34081
Gm34017 12 109508183 to 109512772 4589 + lncRNA gene predicted gene, 34017
Cpgi5106 12 109528251 to 109528577 326 CpG island CpG island 5106
Gm27528 12 109532442 to 109532646 204 + unclassified non-coding RNA gene predicted gene, 27528
Tssr117746 12 109539765 to 109539769 4 - TSS region transcription start site region 117746
Tssr115056 12 109540979 to 109541006 27 + TSS region transcription start site region 115056
Meg3 12 109541001 to 109571726 30725 + lincRNA gene maternally expressed 3
Gm27596 12 109541168 to 109541250 82 + unclassified non-coding RNA gene predicted gene, 27596
Gm27300 12 109544339 to 109544435 96 + unclassified non-coding RNA gene predicted gene, 27300
Mir1906-1 12 109544541 to 109544620 79 + miRNA gene microRNA 1906-1
Tssr115057 12 109544641 to 109544703 62 + TSS region transcription start site region 115057
Tssr115058 12 109544807 to 109544838 31 + TSS region transcription start site region 115058
Tssr115059 12 109544932 to 109544940 8 + TSS region transcription start site region 115059
Tssr115060 12 109545196 to 109545219 23 + TSS region transcription start site region 115060
Tssr115061 12 109545390 to 109545443 53 + TSS region transcription start site region 115061
Tssr115062 12 109545511 to 109545526 15 + TSS region transcription start site region 115062
Tssr115063 12 109545539 to 109545548 9 + TSS region transcription start site region 115063
Tssr115064 12 109545574 to 109545606 32 + TSS region transcription start site region 115064
Tssr115065 12 109545736 to 109545759 23 + TSS region transcription start site region 115065
Tssr115066 12 109545782 to 109545795 13 + TSS region transcription start site region 115066
Tssr117747 12 109545809 to 109545818 9 - TSS region transcription start site region 117747
Tssr117748 12 109545898 to 109545906 8 - TSS region transcription start site region 117748
Tssr115067 12 109545942 to 109545956 14 + TSS region transcription start site region 115067
Tssr115068 12 109546072 to 109546091 19 + TSS region transcription start site region 115068
Tssr115069 12 109546333 to 109546398 65 + TSS region transcription start site region 115069
Tssr115070 12 109546409 to 109546493 84 + TSS region transcription start site region 115070
Tssr115071 12 109547058 to 109547086 28 + TSS region transcription start site region 115071
Tssr115072 12 109547112 to 109547123 11 + TSS region transcription start site region 115072
Tssr115073 12 109547443 to 109547455 12 + TSS region transcription start site region 115073
Tssr115074 12 109547837 to 109547850 13 + TSS region transcription start site region 115074
Tssr115075 12 109547985 to 109547996 11 + TSS region transcription start site region 115075
Tssr115076 12 109548829 to 109548848 19 + TSS region transcription start site region 115076
Tssr115077 12 109549280 to 109549301 21 + TSS region transcription start site region 115077
Cpgi5107 12 109549712 to 109549985 273 CpG island CpG island 5107
Tssr115078 12 109550908 to 109550913 5 + TSS region transcription start site region 115078
Tssr115079 12 109553903 to 109553904 1 + TSS region transcription start site region 115079
Tssr115080 12 109558739 to 109558745 6 + TSS region transcription start site region 115080
Tssr115081 12 109559098 to 109559112 14 + TSS region transcription start site region 115081
Tssr115082 12 109559264 to 109559291 27 + TSS region transcription start site region 115082
Tssr115083 12 109559299 to 109559315 16 + TSS region transcription start site region 115083
Tssr115084 12 109559371 to 109559382 11 + TSS region transcription start site region 115084
Tssr115085 12 109559484 to 109559499 15 + TSS region transcription start site region 115085
Tssr115086 12 109559503 to 109559518 15 + TSS region transcription start site region 115086
Tssr115087 12 109559533 to 109559548 15 + TSS region transcription start site region 115087
Tssr115088 12 109559605 to 109559629 24 + TSS region transcription start site region 115088
Tssr115089 12 109559749 to 109559763 14 + TSS region transcription start site region 115089
Tssr115090 12 109559788 to 109559801 13 + TSS region transcription start site region 115090
Tssr115091 12 109559866 to 109559890 24 + TSS region transcription start site region 115091
Tssr115092 12 109559921 to 109559937 16 + TSS region transcription start site region 115092
Tssr115093 12 109559954 to 109559957 3 + TSS region transcription start site region 115093
Tssr117749 12 109560088 to 109560114 26 - TSS region transcription start site region 117749
Tssr115094 12 109560290 to 109560301 11 + TSS region transcription start site region 115094
Tssr115095 12 109560445 to 109560464 19 + TSS region transcription start site region 115095
Tssr117750 12 109560530 to 109560549 19 - TSS region transcription start site region 117750
Tssr117751 12 109560553 to 109560585 32 - TSS region transcription start site region 117751
Tssr115096 12 109560587 to 109560607 20 + TSS region transcription start site region 115096
Tssr115097 12 109560633 to 109560653 20 + TSS region transcription start site region 115097
Tssr115098 12 109560658 to 109560682 24 + TSS region transcription start site region 115098
Tssr115099 12 109560683 to 109560708 25 + TSS region transcription start site region 115099
Tssr115100 12 109560728 to 109560746 18 + TSS region transcription start site region 115100
Tssr115101 12 109560751 to 109560764 13 + TSS region transcription start site region 115101
Tssr115102 12 109560768 to 109560791 23 + TSS region transcription start site region 115102
Tssr115103 12 109560823 to 109560840 17 + TSS region transcription start site region 115103
Tssr115104 12 109560849 to 109560858 9 + TSS region transcription start site region 115104
Tssr117752 12 109560861 to 109560872 11 - TSS region transcription start site region 117752
Tssr115105 12 109560944 to 109560955 11 + TSS region transcription start site region 115105
Tssr115106 12 109560959 to 109560988 29 + TSS region transcription start site region 115106
Tssr115107 12 109560992 to 109561003 11 + TSS region transcription start site region 115107
Tssr115108 12 109561022 to 109561054 32 + TSS region transcription start site region 115108
Tssr115109 12 109561201 to 109561212 11 + TSS region transcription start site region 115109
Tssr115110 12 109561221 to 109561235 14 + TSS region transcription start site region 115110
Tssr115111 12 109561258 to 109561274 16 + TSS region transcription start site region 115111
Tssr115112 12 109561598 to 109561610 12 + TSS region transcription start site region 115112
Tssr115113 12 109561611 to 109561625 14 + TSS region transcription start site region 115113
Tssr115114 12 109561635 to 109561650 15 + TSS region transcription start site region 115114
Tssr117753 12 109561750 to 109561765 15 - TSS region transcription start site region 117753
Tssr115115 12 109561910 to 109561923 13 + TSS region transcription start site region 115115
Tssr115116 12 109561963 to 109561978 15 + TSS region transcription start site region 115116
Tssr115117 12 109561995 to 109562013 18 + TSS region transcription start site region 115117
Tssr115118 12 109562304 to 109562318 14 + TSS region transcription start site region 115118
Mir770 12 109563692 to 109563785 93 + miRNA gene microRNA 770
Tssr115119 12 109563764 to 109563768 4 + TSS region transcription start site region 115119
Tssr115120 12 109564664 to 109564676 12 + TSS region transcription start site region 115120
Tssr115121 12 109564699 to 109564715 16 + TSS region transcription start site region 115121
Tssr115122 12 109564894 to 109564911 17 + TSS region transcription start site region 115122
Tssr115123 12 109565927 to 109565939 12 + TSS region transcription start site region 115123
Tssr115124 12 109566318 to 109566332 14 + TSS region transcription start site region 115124