Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:108822963-109244803

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc25a29 12 108825878 to 108835876 9998 - protein coding gene solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29
Cpgi5091 12 108826755 to 108827232 477 CpG island CpG island 5091
Gm33813 12 108829533 to 108838664 9131 + lncRNA gene predicted gene, 33813
Tssr115022 12 108829706 to 108829713 7 + TSS region transcription start site region 115022
Cpgi5092 12 108835229 to 108836543 1314 CpG island CpG island 5092
Tssr117706 12 108835786 to 108835792 6 - TSS region transcription start site region 117706
Tssr117707 12 108835809 to 108835832 23 - TSS region transcription start site region 117707
Tssr117708 12 108835845 to 108835893 48 - TSS region transcription start site region 117708
Tssr115023 12 108836027 to 108836088 61 + TSS region transcription start site region 115023
Tssr115024 12 108836385 to 108836396 11 + TSS region transcription start site region 115024
Mir345 12 108836973 to 108837068 95 + miRNA gene microRNA 345
Tssr115025 12 108837045 to 108837049 4 + TSS region transcription start site region 115025
Tssr115026 12 108838545 to 108838605 60 + TSS region transcription start site region 115026
Slc25a47 12 108849813 to 108856815 7002 + protein coding gene solute carrier family 25, member 47
Tssr115027 12 108851122 to 108851129 7 + TSS region transcription start site region 115027
Tssr115028 12 108853477 to 108853508 31 + TSS region transcription start site region 115028
Tssr115029 12 108855332 to 108855362 30 + TSS region transcription start site region 115029
Wars 12 108860030 to 108894174 34144 - protein coding gene tryptophanyl-tRNA synthetase
Gm22079 12 108862564 to 108862669 105 - snRNA gene predicted gene, 22079
Tssr115030 12 108865449 to 108865460 11 + TSS region transcription start site region 115030
Tssr117709 12 108871610 to 108871617 7 - TSS region transcription start site region 117709
Tssr117710 12 108873273 to 108873284 11 - TSS region transcription start site region 117710
Tssr117711 12 108875520 to 108875529 9 - TSS region transcription start site region 117711
Tssr3942 12 108875534 to 108875539 5 - TSS region transcription start site region 3942
Tssr117712 12 108875541 to 108875550 9 - TSS region transcription start site region 117712
Tssr117713 12 108875570 to 108875580 10 - TSS region transcription start site region 117713
Tssr117714 12 108875587 to 108875616 29 - TSS region transcription start site region 117714
Tssr117715 12 108875625 to 108875630 5 - TSS region transcription start site region 117715
Tssr117716 12 108875643 to 108875654 11 - TSS region transcription start site region 117716
5033424D13Rik 12 108878769 to 108879416 647 + unclassified gene RIKEN cDNA 5033424D13 gene
Tssr117717 12 108882741 to 108882768 27 - TSS region transcription start site region 117717
Tssr117718 12 108882772 to 108882779 7 - TSS region transcription start site region 117718
Tssr117719 12 108882784 to 108882800 16 - TSS region transcription start site region 117719
Tssr117720 12 108884336 to 108884346 10 - TSS region transcription start site region 117720
Tssr117721 12 108884398 to 108884411 13 - TSS region transcription start site region 117721
Tssr117722 12 108885799 to 108885808 9 - TSS region transcription start site region 117722
Tssr117723 12 108885883 to 108885891 8 - TSS region transcription start site region 117723
Tssr117724 12 108888531 to 108888544 13 - TSS region transcription start site region 117724
Tssr117725 12 108888750 to 108888774 24 - TSS region transcription start site region 117725
Tssr117726 12 108888776 to 108888783 7 - TSS region transcription start site region 117726
Tssr117727 12 108889306 to 108889309 3 - TSS region transcription start site region 117727
Tssr117728 12 108893198 to 108893215 17 - TSS region transcription start site region 117728
1810056I18Rik 12 108893297 to 108893508 211 unclassified gene RIKEN cDNA 1810056I18 gene
Tssr117729 12 108893361 to 108893369 8 - TSS region transcription start site region 117729
Tssr117730 12 108893383 to 108893397 14 - TSS region transcription start site region 117730
Tssr117731 12 108893400 to 108893411 11 - TSS region transcription start site region 117731
Tssr117732 12 108893413 to 108893493 80 - TSS region transcription start site region 117732
Tssr117733 12 108893499 to 108893518 19 - TSS region transcription start site region 117733
Tssr117734 12 108893521 to 108893546 25 - TSS region transcription start site region 117734
Cpgi5093 12 108893576 to 108894539 963 CpG island CpG island 5093
Tssr115031 12 108893631 to 108893655 24 + TSS region transcription start site region 115031
Tssr115032 12 108893938 to 108893944 6 + TSS region transcription start site region 115032
Tssr117735 12 108894116 to 108894170 54 - TSS region transcription start site region 117735
Wdr25 12 108894228 to 109028452 134224 + protein coding gene WD repeat domain 25
Tssr115033 12 108894279 to 108894312 33 + TSS region transcription start site region 115033
Cpgi5094 12 108959398 to 108959809 411 CpG island CpG island 5094
Gm47980 12 108960912 to 108963832 2920 + unclassified gene predicted gene, 47980
Gm18405 12 108991141 to 108991651 510 - pseudogene predicted gene, 18405
Cpgi5095 12 108994628 to 108994945 317 CpG island CpG island 5095
Begain 12 109032187 to 109068217 36030 - protein coding gene brain-enriched guanylate kinase-associated
Cpgi5096 12 109032963 to 109034803 1840 CpG island CpG island 5096
Tssr117736 12 109033324 to 109033328 4 - TSS region transcription start site region 117736
Cpgi5097 12 109051858 to 109054413 2555 CpG island CpG island 5097
Tssr117737 12 109053087 to 109053104 17 - TSS region transcription start site region 117737
Tssr117738 12 109053310 to 109053321 11 - TSS region transcription start site region 117738
Tssr117739 12 109053723 to 109053761 38 - TSS region transcription start site region 117739
Cpgi5098 12 109067436 to 109068796 1360 CpG island CpG island 5098
Tssr117740 12 109068173 to 109068247 74 - TSS region transcription start site region 117740
Tssr117741 12 109068356 to 109068368 12 - TSS region transcription start site region 117741
Cpgi5099 12 109073361 to 109073523 162 CpG island CpG island 5099
Tssr117742 12 109073392 to 109073410 18 - TSS region transcription start site region 117742
Tssr117743 12 109073412 to 109073445 33 - TSS region transcription start site region 117743
Mif-ps7 12 109098227 to 109098553 326 + pseudogene macrophage migration inhibitory factor, pseudogene 7
D12Mit80 12 109217459 to 109217650 191 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 80
Plyid 12 109217459 to 115921502 6704043 QTL Polymeric IgA dominance