Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:108539121-108739149

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eml1 12 108371002 to 108539576 168574 + protein coding gene echinoderm microtubule associated protein like 1
Gm16596 12 108537243 to 108555618 18375 - antisense lncRNA gene predicted gene, 16596
Cpgi5087 12 108554199 to 108555674 1475 CpG island CpG island 5087
Tssr114983 12 108554670 to 108554689 19 + TSS region transcription start site region 114983
Tssr114984 12 108554701 to 108554723 22 + TSS region transcription start site region 114984
Evl 12 108554720 to 108688516 133796 + protein coding gene Ena-vasodilator stimulated phosphoprotein
Tssr114985 12 108554734 to 108554752 18 + TSS region transcription start site region 114985
Tssr114986 12 108554951 to 108554980 29 + TSS region transcription start site region 114986
D130067P18Rik 12 108579138 to 108584356 5218 unclassified gene RIKEN cDNA D130067P18 gene
Tssr114987 12 108605757 to 108605814 57 + TSS region transcription start site region 114987
Tssr114988 12 108606939 to 108606943 4 + TSS region transcription start site region 114988
Tssr114989 12 108635704 to 108635726 22 + TSS region transcription start site region 114989
Tssr114990 12 108635743 to 108635839 96 + TSS region transcription start site region 114990
Tssr114991 12 108635846 to 108635858 12 + TSS region transcription start site region 114991
Tssr114992 12 108636236 to 108636255 19 + TSS region transcription start site region 114992
Tssr117688 12 108636817 to 108636830 13 - TSS region transcription start site region 117688
Tssr117689 12 108639121 to 108639149 28 - TSS region transcription start site region 117689
Tssr114993 12 108648399 to 108648410 11 + TSS region transcription start site region 114993
Tssr114994 12 108652945 to 108652975 30 + TSS region transcription start site region 114994
Mir342 12 108658620 to 108658718 98 + miRNA gene microRNA 342
Tssr114995 12 108658679 to 108658708 29 + TSS region transcription start site region 114995
Tssr114996 12 108667189 to 108667206 17 + TSS region transcription start site region 114996
Tssr114997 12 108667258 to 108667264 6 + TSS region transcription start site region 114997
Tssr114998 12 108675453 to 108675492 39 + TSS region transcription start site region 114998
Tssr114999 12 108675499 to 108675524 25 + TSS region transcription start site region 114999
Tssr115000 12 108676218 to 108676231 13 + TSS region transcription start site region 115000
Tssr115001 12 108676293 to 108676296 3 + TSS region transcription start site region 115001
Gm40571 12 108676485 to 108681685 5200 - lncRNA gene predicted gene, 40571
Tssr115002 12 108677189 to 108677193 4 + TSS region transcription start site region 115002
Tssr115003 12 108677632 to 108677641 9 + TSS region transcription start site region 115003
Tssr115004 12 108677669 to 108677674 5 + TSS region transcription start site region 115004
Tssr115005 12 108677727 to 108677737 10 + TSS region transcription start site region 115005
Tssr115006 12 108677753 to 108677760 7 + TSS region transcription start site region 115006
Tssr115007 12 108677781 to 108677797 16 + TSS region transcription start site region 115007
Ebao2 12 108679049 to 82166529 -26512520 QTL epidermolysis bullosa acquisita onset 2
Pwgrq7 12 108679049 to 90970593 -17708456 QTL pre-weaning growth rate QTL 7
Tssr117690 12 108680450 to 108680454 4 - TSS region transcription start site region 117690
Tssr115008 12 108684647 to 108684659 12 + TSS region transcription start site region 115008
Degs2 12 108686792 to 108702306 15514 - protein coding gene delta(4)-desaturase, sphingolipid 2
Tssr115009 12 108688127 to 108688153 26 + TSS region transcription start site region 115009
Tssr117691 12 108688510 to 108688515 5 - TSS region transcription start site region 117691
Gm33467 12 108695486 to 108696446 960 + antisense lncRNA gene predicted gene, 33467
Cpgi5088 12 108701751 to 108702742 991 CpG island CpG island 5088
Tssr117692 12 108702265 to 108702320 55 - TSS region transcription start site region 117692
Tssr117693 12 108702322 to 108702331 9 - TSS region transcription start site region 117693
Gm40572 12 108703524 to 108711559 8035 - lncRNA gene predicted gene, 40572
Tssr117694 12 108710972 to 108710995 23 - TSS region transcription start site region 117694
Tssr115010 12 108713773 to 108713780 7 + TSS region transcription start site region 115010
Gm23872 12 108721848 to 108721924 76 - miRNA gene predicted gene, 23872
Gm48048 12 108737141 to 108737626 485 - pseudogene predicted gene, 48048