MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:108321180-108421196

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hhipl1	12	108305918 to 108328300	22382	+	protein coding gene	hedgehog interacting protein-like 1
4930478K11Rik	12	108313779 to 108328030	14251	-	antisense lncRNA gene	RIKEN cDNA 4930478K11 gene
Cpgi5082	12	108327231 to 108328764	1533		CpG island	CpG island 5082
Cpgi5083	12	108332972 to 108334967	1995		CpG island	CpG island 5083
Tssr114962	12	108334239 to 108334260	21	+	TSS region	transcription start site region 114962
Tssr114963	12	108334341 to 108334406	65	+	TSS region	transcription start site region 114963
Cyp46a1	12	108334381 to 108362234	27853	+	protein coding gene	cytochrome P450, family 46, subfamily a, polypeptide 1
Cpgi5084	12	108352694 to 108353173	479		CpG island	CpG island 5084
Tssr114964	12	108370985 to 108371025	40	+	TSS region	transcription start site region 114964
Eml1	12	108371002 to 108539576	168574	+	protein coding gene	echinoderm microtubule associated protein like 1
Tssr114965	12	108371180 to 108371196	16	+	TSS region	transcription start site region 114965
Tssr114966	12	108371198 to 108371210	12	+	TSS region	transcription start site region 114966
Tssr114967	12	108371221 to 108371244	23	+	TSS region	transcription start site region 114967
Cpgi5085	12	108372277 to 108372490	213		CpG island	CpG island 5085
Tssr114968	12	108410573 to 108410585	12	+	TSS region	transcription start site region 114968
Tssr114969	12	108410625 to 108410662	37	+	TSS region	transcription start site region 114969
Tssr114970	12	108410880 to 108410899	19	+	TSS region	transcription start site region 114970