MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:107724390-107925701

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930465M20Rik	12	107723743 to 107735488	11745	-	lincRNA gene	RIKEN cDNA 4930465M20 gene
D12Mit1010	12	107735177 to 107735394	217		DNA segment	DNA Segment, Chr 12, Massachusetts Institute of Technology 1010
Tssr117626	12	107735490 to 107735501	11	-	TSS region	transcription start site region 117626
Gm15208	12	107744136 to 107784041	39905	-	lincRNA gene	predicted gene 15208
Gm33341	12	107824390 to 107825701	1311	+	lncRNA gene	predicted gene, 33341
4930440F04Rik	12	107899065 to 107899900	835		unclassified gene	RIKEN cDNA 4930440F04 gene
Tssr3939	12	107903928 to 107903932	4	+	TSS region	transcription start site region 3939
Bcl11b	12	107910403 to 108003602	93199	-	protein coding gene	B cell leukemia/lymphoma 11B
Tssr117627	12	107911609 to 107911615	6	-	TSS region	transcription start site region 117627
Tssr117628	12	107912034 to 107912047	13	-	TSS region	transcription start site region 117628
Tssr117629	12	107912220 to 107912231	11	-	TSS region	transcription start site region 117629
Tssr117630	12	107912650 to 107912665	15	-	TSS region	transcription start site region 117630
Tssr117631	12	107913499 to 107913510	11	-	TSS region	transcription start site region 117631
Tssr117632	12	107913604 to 107913609	5	-	TSS region	transcription start site region 117632
Tssr117633	12	107915024 to 107915033	9	-	TSS region	transcription start site region 117633
Cpgi5070	12	107915227 to 107917585	2358		CpG island	CpG island 5070
MCA1	12	107923581 to 107923795	214		DNA segment	DNA segment, MCA1, multiple CA repeat 1