Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:107119086-107799221

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr117620 12 107123708 to 107123720 12 - TSS region transcription start site region 117620
Tssr114936 12 107124441 to 107124456 15 + TSS region transcription start site region 114936
Tssr114937 12 107129658 to 107129669 11 + TSS region transcription start site region 114937
Gm16085 12 107129681 to 107132576 2895 + lincRNA gene predicted gene 16085
Tssr117621 12 107131475 to 107131487 12 - TSS region transcription start site region 117621
Tssr117622 12 107131514 to 107131523 9 - TSS region transcription start site region 117622
Tssr117623 12 107131918 to 107131926 8 - TSS region transcription start site region 117623
Tssr114938 12 107141504 to 107141517 13 + TSS region transcription start site region 114938
Tssr114939 12 107141558 to 107141568 10 + TSS region transcription start site region 114939
Tssr117624 12 107146786 to 107146792 6 - TSS region transcription start site region 117624
Gm16084 12 107147164 to 107160207 13043 - lincRNA gene predicted gene 16084
Tssr117625 12 107157156 to 107157171 15 - TSS region transcription start site region 117625
Tssr114940 12 107157336 to 107157372 36 + TSS region transcription start site region 114940
Tssr114941 12 107159728 to 107159732 4 + TSS region transcription start site region 114941
Tssr114942 12 107183548 to 107183566 18 + TSS region transcription start site region 114942
Gm2800 12 107183555 to 107186734 3179 + lincRNA gene predicted gene 2800
Cpgi5069 12 107183704 to 107183866 162 CpG island CpG island 5069
D12Mit122 12 107203137 to 107203286 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 122
Gm5187 12 107205076 to 107206066 990 - pseudogene predicted gene 5187
Tssr114943 12 107225535 to 107225538 3 + TSS region transcription start site region 114943
D12Mit139 12 107342009 to 107342134 125 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 139
Bbaa6 12 107342009 to 107342134 125 QTL B.burgdorferi-associated arthritis 6
Bbaa27 12 107342134 to 91287446 -16054688 QTL B.burgdorferi-associated arthritis 27
Tssr114944 12 107379056 to 107379057 1 + TSS region transcription start site region 114944
Gm17052 12 107419141 to 107419429 288 + pseudogene predicted gene 17052
D12Mit53 12 107459086 to 107459221 135 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 53
Gm3234 12 107463269 to 107488583 25314 - lincRNA gene predicted gene 3234
3110018I06Rik 12 107488632 to 107489636 1004 + unclassified gene RIKEN cDNA 3110018I06 gene
Gm9006 12 107613000 to 107613840 840 + pseudogene predicted gene 9006
Gm33236 12 107624195 to 107649915 25720 - lncRNA gene predicted gene, 33236
Tssr114945 12 107691066 to 107691077 11 + TSS region transcription start site region 114945
4930465M20Rik 12 107723743 to 107735488 11745 - lincRNA gene RIKEN cDNA 4930465M20 gene
D12Mit1010 12 107735177 to 107735394 217 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 1010
Tssr117626 12 107735490 to 107735501 11 - TSS region transcription start site region 117626
Gm15208 12 107744136 to 107784041 39905 - lincRNA gene predicted gene 15208