Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:106963269-107988583

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit132 12 106972772 to 106972901 129 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 132
Heal5 12 106972772 to 106972901 129 QTL wound healing/regeneration 5
5830406C21Rik 12 107070897 to 107073453 2556 unclassified gene RIKEN cDNA 5830406C21 gene
Gm16086 12 107079360 to 107099673 20313 - lincRNA gene predicted gene 16086
Gm46321 12 107111059 to 107112147 1088 - protein coding gene predicted gene, 46321
Tssr117620 12 107123708 to 107123720 12 - TSS region transcription start site region 117620
Tssr114936 12 107124441 to 107124456 15 + TSS region transcription start site region 114936
Tssr114937 12 107129658 to 107129669 11 + TSS region transcription start site region 114937
Gm16085 12 107129681 to 107132576 2895 + lincRNA gene predicted gene 16085
Tssr117621 12 107131475 to 107131487 12 - TSS region transcription start site region 117621
Tssr117622 12 107131514 to 107131523 9 - TSS region transcription start site region 117622
Tssr117623 12 107131918 to 107131926 8 - TSS region transcription start site region 117623
Tssr114938 12 107141504 to 107141517 13 + TSS region transcription start site region 114938
Tssr114939 12 107141558 to 107141568 10 + TSS region transcription start site region 114939
Tssr117624 12 107146786 to 107146792 6 - TSS region transcription start site region 117624
Gm16084 12 107147164 to 107160207 13043 - lincRNA gene predicted gene 16084
Tssr117625 12 107157156 to 107157171 15 - TSS region transcription start site region 117625
Tssr114940 12 107157336 to 107157372 36 + TSS region transcription start site region 114940
Tssr114941 12 107159728 to 107159732 4 + TSS region transcription start site region 114941
Tssr114942 12 107183548 to 107183566 18 + TSS region transcription start site region 114942
Gm2800 12 107183555 to 107186734 3179 + lincRNA gene predicted gene 2800
Cpgi5069 12 107183704 to 107183866 162 CpG island CpG island 5069
D12Mit122 12 107203137 to 107203286 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 122
Gm5187 12 107205076 to 107206066 990 - pseudogene predicted gene 5187
Tssr114943 12 107225535 to 107225538 3 + TSS region transcription start site region 114943
Bbaa6 12 107342009 to 107342134 125 QTL B.burgdorferi-associated arthritis 6
D12Mit139 12 107342009 to 107342134 125 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 139
Bbaa27 12 107342134 to 91287446 -16054688 QTL B.burgdorferi-associated arthritis 27
Tssr114944 12 107379056 to 107379057 1 + TSS region transcription start site region 114944
Gm17052 12 107419141 to 107419429 288 + pseudogene predicted gene 17052
D12Mit53 12 107459086 to 107459221 135 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 53
Gm3234 12 107463269 to 107488583 25314 - lincRNA gene predicted gene 3234
3110018I06Rik 12 107488632 to 107489636 1004 + unclassified gene RIKEN cDNA 3110018I06 gene
Gm9006 12 107613000 to 107613840 840 + pseudogene predicted gene 9006
Gm33236 12 107624195 to 107649915 25720 - lncRNA gene predicted gene, 33236
Tssr114945 12 107691066 to 107691077 11 + TSS region transcription start site region 114945
4930465M20Rik 12 107723743 to 107735488 11745 - lincRNA gene RIKEN cDNA 4930465M20 gene
D12Mit1010 12 107735177 to 107735394 217 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 1010
Tssr117626 12 107735490 to 107735501 11 - TSS region transcription start site region 117626
Gm15208 12 107744136 to 107784041 39905 - lincRNA gene predicted gene 15208
Gm33341 12 107824390 to 107825701 1311 + lncRNA gene predicted gene, 33341
4930440F04Rik 12 107899065 to 107899900 835 unclassified gene RIKEN cDNA 4930440F04 gene
Tssr3939 12 107903928 to 107903932 4 + TSS region transcription start site region 3939
Bcl11b 12 107910403 to 108003602 93199 - protein coding gene B cell leukemia/lymphoma 11B
Tssr117627 12 107911609 to 107911615 6 - TSS region transcription start site region 117627
Tssr117628 12 107912034 to 107912047 13 - TSS region transcription start site region 117628
Tssr117629 12 107912220 to 107912231 11 - TSS region transcription start site region 117629
Tssr117630 12 107912650 to 107912665 15 - TSS region transcription start site region 117630
Tssr117631 12 107913499 to 107913510 11 - TSS region transcription start site region 117631
Tssr117632 12 107913604 to 107913609 5 - TSS region transcription start site region 117632
Tssr117633 12 107915024 to 107915033 9 - TSS region transcription start site region 117633
Cpgi5070 12 107915227 to 107917585 2358 CpG island CpG island 5070
MCA1 12 107923581 to 107923795 214 DNA segment DNA segment, MCA1, multiple CA repeat 1
Tssr117634 12 107928873 to 107928879 6 - TSS region transcription start site region 117634
Tssr117635 12 107931308 to 107931310 2 - TSS region transcription start site region 117635
Tssr117636 12 107938646 to 107938662 16 - TSS region transcription start site region 117636
Tssr117637 12 107938672 to 107938691 19 - TSS region transcription start site region 117637
Tssr117638 12 107938737 to 107938749 12 - TSS region transcription start site region 117638
Tssr117639 12 107938752 to 107938768 16 - TSS region transcription start site region 117639
Tssr117640 12 107938773 to 107938784 11 - TSS region transcription start site region 117640
Tssr117641 12 107938793 to 107938801 8 - TSS region transcription start site region 117641
Tssr117642 12 107938830 to 107938839 9 - TSS region transcription start site region 117642
Tssr117643 12 107938948 to 107938958 10 - TSS region transcription start site region 117643
Tssr117644 12 107939059 to 107939074 15 - TSS region transcription start site region 117644
Tssr117645 12 107939090 to 107939123 33 - TSS region transcription start site region 117645
Tssr117646 12 107939130 to 107939141 11 - TSS region transcription start site region 117646
Tssr117647 12 107939146 to 107939153 7 - TSS region transcription start site region 117647
Tssr117648 12 107939206 to 107939223 17 - TSS region transcription start site region 117648
Tssr117649 12 107939232 to 107939249 17 - TSS region transcription start site region 117649
Tssr117650 12 107939270 to 107939311 41 - TSS region transcription start site region 117650
Tssr117651 12 107945572 to 107945576 4 - TSS region transcription start site region 117651
Tssr117652 12 107956651 to 107956654 3 - TSS region transcription start site region 117652
Tssr117653 12 107959038 to 107959046 8 - TSS region transcription start site region 117653
Tssr117654 12 107960214 to 107960219 5 - TSS region transcription start site region 117654
A130014H13Rik 12 107970456 to 107975278 4822 unclassified gene RIKEN cDNA A130014H13 gene
Tssr3940 12 107970567 to 107970585 18 - TSS region transcription start site region 3940
Tssr117655 12 107970712 to 107970716 4 - TSS region transcription start site region 117655
Tssr117656 12 107972036 to 107972038 2 - TSS region transcription start site region 117656
Tssr117657 12 107974946 to 107974950 4 - TSS region transcription start site region 117657
Cpgi5071 12 107976657 to 107976882 225 CpG island CpG island 5071
Cpgi5072 12 107979949 to 107980798 849 CpG island CpG island 5072
Tssr117658 12 107980786 to 107980804 18 - TSS region transcription start site region 117658
Tssr117659 12 107985290 to 107985296 6 - TSS region transcription start site region 117659