Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:105254019-105562005

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5039 12 105336273 to 105337786 1513 CpG island CpG island 5039
Tunar 12 105336594 to 105383932 47338 + lincRNA gene Tcl1 upstream neural differentiation associated RNA
Tssr114898 12 105336808 to 105336837 29 + TSS region transcription start site region 114898
Tssr114899 12 105336922 to 105336970 48 + TSS region transcription start site region 114899
Tssr114900 12 105337160 to 105337170 10 + TSS region transcription start site region 114900
Tssr114901 12 105337180 to 105337191 11 + TSS region transcription start site region 114901
Tssr114902 12 105337195 to 105337225 30 + TSS region transcription start site region 114902
Prdt4 12 105342095 to 105342236 141 QTL prion disease incubation time 4
D12Mit28 12 105342095 to 105342236 141 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 28
Gm2721 12 105394856 to 105403760 8904 - lincRNA gene predicted gene 2721
Tssr114903 12 105395578 to 105395580 2 + TSS region transcription start site region 114903
Gm46376 12 105404019 to 105412005 7986 + lincRNA gene predicted gene, 46376
Cpgi5040 12 105453661 to 105454336 675 CpG island CpG island 5040
Tssr114904 12 105453831 to 105453919 88 + TSS region transcription start site region 114904
D430019H16Rik 12 105453856 to 105493095 39239 + protein coding gene RIKEN cDNA D430019H16 gene
Tssr114905 12 105454009 to 105454027 18 + TSS region transcription start site region 114905
Tssr114906 12 105454035 to 105454047 12 + TSS region transcription start site region 114906
Tssr114907 12 105475901 to 105475911 10 + TSS region transcription start site region 114907
Tssr114908 12 105488651 to 105488662 11 + TSS region transcription start site region 114908
Tssr117605 12 105489323 to 105489334 11 - TSS region transcription start site region 117605
Gm40566 12 105491795 to 105497086 5291 - lncRNA gene predicted gene, 40566
Tssr114909 12 105513411 to 105513423 12 + TSS region transcription start site region 114909
AU015791 12 105513480 to 105515246 1766 + lincRNA gene expressed sequence AU015791
Gm40565 12 105514468 to 105517750 3282 - lncRNA gene predicted gene, 40565
Tssr117606 12 105523473 to 105523487 14 - TSS region transcription start site region 117606
Gm47796 12 105561263 to 105562556 1293 + lincRNA gene predicted gene, 47796