Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:105026358-105331145

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47648 12 105021359 to 105029936 8577 + lincRNA gene predicted gene, 47648
Gm47650 12 105027642 to 105027963 321 - pseudogene predicted gene, 47650
Snhg10 12 105030617 to 105032279 1662 - lncRNA gene small nucleolar RNA host gene 10
Scarna13 12 105031075 to 105031349 274 - snoRNA gene small Cajal body-specific RNA 1
Mir3069 12 105031077 to 105031141 64 - miRNA gene microRNA 3069
Cpgi5038 12 105032019 to 105033250 1231 CpG island CpG island 5038
Tssr117599 12 105032056 to 105032060 4 - TSS region transcription start site region 117599
Tssr117600 12 105032240 to 105032258 18 - TSS region transcription start site region 117600
Tssr117601 12 105032261 to 105032307 46 - TSS region transcription start site region 117601
Glrx5 12 105032618 to 105040911 8293 + protein coding gene glutaredoxin 5
Tssr114897 12 105032638 to 105032705 67 + TSS region transcription start site region 114897
Gm46374 12 105036168 to 105040268 4100 - lncRNA gene predicted gene, 46374
D12Mit29 12 105039595 to 105039857 262 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 29
Gm31884 12 105047904 to 105053457 5553 + lncRNA gene predicted gene, 31884
Gm31829 12 105058207 to 105102983 44776 - lncRNA gene predicted gene, 31829
Lifespan3 12 105086615 to 105086762 147 QTL life span 3
Chlq17 12 105086615 to 105086762 147 QTL circulating hormone level QTL 17
D12Mit167 12 105086615 to 105086762 147 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 167
Gm32062 12 105120261 to 105138103 17842 + lncRNA gene predicted gene, 32062
Gm47672 12 105135196 to 105135441 245 + pseudogene predicted gene, 47672
Tcl1b2 12 105147012 to 105155225 8213 + protein coding gene T cell leukemia/lymphoma 1B, 2
Tcl1b1 12 105159704 to 105166625 6921 + protein coding gene T cell leukemia/lymphoma 1B, 1
Tcl1b5 12 105176358 to 105181145 4787 + protein coding gene T cell leukemia/lymphoma 1B, 5
Tcl1b3 12 105191045 to 105195399 4354 + protein coding gene T cell leukemia/lymphoma 1B, 3
Tcl1b4 12 105201957 to 105206993 5036 + protein coding gene T cell leukemia/lymphoma 1B, 4
Tcl1 12 105216753 to 105222737 5984 - protein coding gene T cell lymphoma breakpoint 1
Tssr117602 12 105222712 to 105222722 10 - TSS region transcription start site region 117602
Tssr117603 12 105222734 to 105222745 11 - TSS region transcription start site region 117603
Tssr117604 12 105222761 to 105222772 11 - TSS region transcription start site region 117604