Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:104983565-105027957

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syne3 12 104929933 to 105009809 79876 - protein coding gene spectrin repeat containing, nuclear envelope family member 3
Tssr117593 12 104988270 to 104988273 3 - TSS region transcription start site region 117593
Tssr3935 12 104988762 to 104988766 4 - TSS region transcription start site region 3935
Tssr114891 12 104992583 to 104992594 11 + TSS region transcription start site region 114891
Tssr117594 12 104998682 to 104998710 28 - TSS region transcription start site region 117594
Tssr114892 12 105001198 to 105001247 49 + TSS region transcription start site region 114892
Tssr114893 12 105003443 to 105003461 18 + TSS region transcription start site region 114893
Gm31742 12 105003565 to 105007957 4392 + lncRNA gene predicted gene, 31742
Tssr117595 12 105006872 to 105006876 4 - TSS region transcription start site region 117595
Cpgi5037 12 105009405 to 105010415 1010 CpG island CpG island 5037
Tssr117596 12 105010005 to 105010021 16 - TSS region transcription start site region 117596
Tssr117597 12 105010023 to 105010059 36 - TSS region transcription start site region 117597
Tssr117598 12 105010062 to 105010086 24 - TSS region transcription start site region 117598
Gm46375 12 105012683 to 105023679 10996 - lncRNA gene predicted gene, 46375
Tssr3936 12 105013113 to 105013140 27 - TSS region transcription start site region 3936
Tssr114894 12 105019496 to 105019506 10 + TSS region transcription start site region 114894
Tssr114895 12 105019531 to 105019557 26 + TSS region transcription start site region 114895
Tssr114896 12 105020113 to 105020143 30 + TSS region transcription start site region 114896
Gm47648 12 105021359 to 105029936 8577 + lincRNA gene predicted gene, 47648
Gm47650 12 105027642 to 105027963 321 - pseudogene predicted gene, 47650