MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:104592742-104846952

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi5033	12	104593423 to 104593811	388		CpG island	CpG island 5033
Cpgi5034	12	104606085 to 104606370	285		CpG island	CpG island 5034
Gm31573	12	104661424 to 104662697	1273	-	lncRNA gene	predicted gene, 31573
Tssr114883	12	104683466 to 104683485	19	+	TSS region	transcription start site region 114883
Dicer1	12	104687742 to 104751952	64210	-	protein coding gene	dicer 1, ribonuclease type III
Cpgi5035	12	104751077 to 104752692	1615		CpG island	CpG island 5035
Tssr117580	12	104751900 to 104751937	37	-	TSS region	transcription start site region 117580
Tssr117581	12	104752025 to 104752115	90	-	TSS region	transcription start site region 117581
Tssr114884	12	104752180 to 104752224	44	+	TSS region	transcription start site region 114884
Tssr117582	12	104761506 to 104761524	18	-	TSS region	transcription start site region 117582
Tssr114885	12	104761626 to 104761639	13	+	TSS region	transcription start site region 114885
Clmn	12	104763117 to 104865076	101959	-	protein coding gene	calmin
D12Mit195.2	12	104800995 to 104801126	131		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 195.2
D12Mit195	12	104801109 to 104801248	139		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 195
D12Mit195.1	12	104801216 to 104801327	111		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 195.1
Tssr114886	12	104819234 to 104819258	24	+	TSS region	transcription start site region 114886
Tssr114887	12	104820279 to 104820324	45	+	TSS region	transcription start site region 114887