MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:104461772-104661796

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi5026	12	104471200 to 104473734	2534		CpG island	CpG island 5026
Gsc	12	104471209 to 104473236	2027	-	protein coding gene	goosecoid homeobox
Tssr117576	12	104473236 to 104473254	18	-	TSS region	transcription start site region 117576
Gm10000	12	104473331 to 104477759	4428	+	bidirectional promoter lncRNA gene	predicted gene 10000
Tssr117577	12	104473366 to 104473373	7	-	TSS region	transcription start site region 117577
Cpgi5027	12	104474341 to 104474955	614		CpG island	CpG island 5027
Cpgi5028	12	104475956 to 104476375	419		CpG island	CpG island 5028
Gm49732	12	104509198 to 104525977	16779	+	lincRNA gene	predicted gene, 49732
Tssr117578	12	104512657 to 104512659	2	-	TSS region	transcription start site region 117578
D12Mit100	12	104530304 to 104530397	93		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 100
Cpgi5029	12	104531732 to 104531994	262		CpG island	CpG island 5029
Cpgi5030	12	104546056 to 104546259	203		CpG island	CpG island 5030
Tssr117579	12	104561772 to 104561796	24	-	TSS region	transcription start site region 117579
Cpgi5031	12	104568254 to 104568568	314		CpG island	CpG island 5031
D12Mit290	12	104573023 to 104573115	92		DNA segment	DNA Segment, Chr 12, Massachusetts Institute of Technology 290
Cpgi5032	12	104584042 to 104584382	340		CpG island	CpG island 5032
Cpgi5033	12	104593423 to 104593811	388		CpG island	CpG island 5033
Cpgi5034	12	104606085 to 104606370	285		CpG island	CpG island 5034
Gm31573	12	104661424 to 104662697	1273	-	lncRNA gene	predicted gene, 31573