Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:103984544-104451129

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114 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Serpina11 12 103980243 to 103989957 9714 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
Gm28577 12 103984792 to 103996579 11787 - unclassified non-coding RNA gene predicted gene 28577
Tssr117555 12 103989919 to 103989946 27 - TSS region transcription start site region 117555
Tssr117556 12 103989950 to 103989972 22 - TSS region transcription start site region 117556
Tssr3932 12 103992390 to 103992393 3 + TSS region transcription start site region 3932
Serpina9 12 103996613 to 104013776 17163 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
Tssr117557 12 104002726 to 104002734 8 - TSS region transcription start site region 117557
Tssr117558 12 104008736 to 104008753 17 - TSS region transcription start site region 117558
Tssr117559 12 104009000 to 104009035 35 - TSS region transcription start site region 117559
Tssr117560 12 104013640 to 104013658 18 - TSS region transcription start site region 117560
Tssr117561 12 104013753 to 104013776 23 - TSS region transcription start site region 117561
Tssr117562 12 104013779 to 104013788 9 - TSS region transcription start site region 117562
Gm37496 12 104021919 to 104024427 2508 - unclassified gene predicted gene, 37496
Serpina12 12 104028769 to 104044443 15674 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
Gm31271 12 104032440 to 104037723 5283 + lncRNA gene predicted gene, 31271
Tssr117563 12 104032870 to 104032893 23 - TSS region transcription start site region 117563
Tssr117564 12 104035810 to 104035820 10 - TSS region transcription start site region 117564
Tssr117565 12 104035831 to 104035852 21 - TSS region transcription start site region 117565
Tssr117566 12 104044288 to 104044299 11 - TSS region transcription start site region 117566
Tssr117567 12 104044350 to 104044366 16 - TSS region transcription start site region 117567
Tssr117568 12 104044375 to 104044390 15 - TSS region transcription start site region 117568
Tssr117569 12 104044431 to 104044447 16 - TSS region transcription start site region 117569
Tssr114822 12 104052726 to 104052755 29 + TSS region transcription start site region 114822
Tssr114823 12 104077936 to 104077952 16 + TSS region transcription start site region 114823
Serpina4-ps1 12 104080649 to 104086724 6075 + pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1
Tssr114824 12 104084174 to 104084185 11 + TSS region transcription start site region 114824
Tssr114825 12 104084220 to 104084231 11 + TSS region transcription start site region 114825
Tssr114826 12 104100982 to 104100998 16 + TSS region transcription start site region 114826
Tssr114827 12 104101020 to 104101028 8 + TSS region transcription start site region 114827
Tssr114828 12 104101087 to 104101098 11 + TSS region transcription start site region 114828
Serpina5 12 104101113 to 104106137 5024 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 5
Tssr114829 12 104101142 to 104101157 15 + TSS region transcription start site region 114829
Tssr114830 12 104101160 to 104101169 9 + TSS region transcription start site region 114830
Tssr114831 12 104101173 to 104101176 3 + TSS region transcription start site region 114831
Gm23289 12 104109283 to 104109390 107 + rRNA gene predicted gene, 23289
Serpina3a 12 104112724 to 104121896 9172 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3A
Tssr114832 12 104127995 to 104128002 7 + TSS region transcription start site region 114832
Serpina3b 12 104127996 to 104139545 11549 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3B
Serpina3c 12 104146907 to 104153931 7024 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3C
Tssr117570 12 104153058 to 104153066 8 - TSS region transcription start site region 117570
Tssr117571 12 104153815 to 104153833 18 - TSS region transcription start site region 117571
Tssr117572 12 104153846 to 104153891 45 - TSS region transcription start site region 117572
Serpina3d-ps 12 104175571 to 104178310 2739 - pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 3D, pseudogene
Serpina3e-ps 12 104189517 to 104192926 3409 - pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 3E, pseudogene
Tssr117573 12 104194859 to 104194865 6 - TSS region transcription start site region 117573
Tssr114833 12 104214512 to 104214532 20 + TSS region transcription start site region 114833
Tssr114834 12 104214538 to 104214549 11 + TSS region transcription start site region 114834
Serpina3f 12 104214544 to 104221129 6585 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3F
Gm8918 12 104228917 to 104230003 1086 - pseudogene predicted gene 8918
Tssr114835 12 104236126 to 104236150 24 + TSS region transcription start site region 114835
Tssr114836 12 104236239 to 104236245 6 + TSS region transcription start site region 114836
Serpina3g 12 104236242 to 104241934 5692 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3G
Tssr114837 12 104241252 to 104241264 12 + TSS region transcription start site region 114837
Tssr114838 12 104247892 to 104247897 5 + TSS region transcription start site region 114838
Serpina3h 12 104247905 to 104253669 5764 + pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 3H
Tssr114839 12 104263117 to 104263129 12 + TSS region transcription start site region 114839
Serpina3i 12 104263122 to 104269372 6250 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3I
Tssr114840 12 104263133 to 104263158 25 + TSS region transcription start site region 114840
D12Mit102a 12 104298444 to 104298576 132 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 102a
Tssr114841 12 104300703 to 104300736 33 + TSS region transcription start site region 114841
D12Mit102b 12 104302190 to 104302388 198 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 102b
Serpina3j 12 104314553 to 104320725 6172 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3J
Tssr114842 12 104338372 to 104338416 44 + TSS region transcription start site region 114842
Serpina3k 12 104338486 to 104345739 7253 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3K
Tssr114843 12 104339068 to 104339101 33 + TSS region transcription start site region 114843
Tssr114844 12 104339195 to 104339237 42 + TSS region transcription start site region 114844
Tssr114845 12 104339254 to 104339269 15 + TSS region transcription start site region 114845
Tssr114846 12 104339339 to 104339358 19 + TSS region transcription start site region 114846
Tssr114847 12 104339363 to 104339381 18 + TSS region transcription start site region 114847
Tssr114848 12 104340483 to 104340488 5 + TSS region transcription start site region 114848
Tssr114849 12 104340510 to 104340521 11 + TSS region transcription start site region 114849
Tssr114850 12 104340527 to 104340565 38 + TSS region transcription start site region 114850
Tssr114851 12 104340586 to 104340638 52 + TSS region transcription start site region 114851
Tssr114852 12 104340643 to 104340670 27 + TSS region transcription start site region 114852
Tssr114853 12 104340854 to 104340870 16 + TSS region transcription start site region 114853
Tssr117574 12 104340869 to 104340909 40 - TSS region transcription start site region 117574
Tssr114854 12 104340997 to 104341040 43 + TSS region transcription start site region 114854
Tssr114855 12 104343064 to 104343072 8 + TSS region transcription start site region 114855
Tssr117575 12 104343100 to 104343113 13 - TSS region transcription start site region 117575
Tssr114856 12 104344120 to 104344127 7 + TSS region transcription start site region 114856
Tssr114857 12 104344132 to 104344144 12 + TSS region transcription start site region 114857
Tssr114858 12 104344204 to 104344228 24 + TSS region transcription start site region 114858
Tssr114859 12 104345269 to 104345275 6 + TSS region transcription start site region 114859
Tssr114860 12 104345289 to 104345311 22 + TSS region transcription start site region 114860
Tssr114861 12 104345313 to 104345328 15 + TSS region transcription start site region 114861
Tssr114862 12 104345344 to 104345354 10 + TSS region transcription start site region 114862
Tssr114863 12 104345361 to 104345372 11 + TSS region transcription start site region 114863
Tssr114864 12 104345411 to 104345417 6 + TSS region transcription start site region 114864
Tssr114865 12 104345462 to 104345471 9 + TSS region transcription start site region 114865
Tssr114866 12 104345475 to 104345502 27 + TSS region transcription start site region 114866
Tssr114867 12 104345531 to 104345540 9 + TSS region transcription start site region 114867
Tssr114868 12 104345548 to 104345559 11 + TSS region transcription start site region 114868
Serpina3l-ps 12 104358003 to 104363534 5531 + pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 3L, pseudogene
Serpina3m 12 104387157 to 104394259 7102 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3M
Tssr114869 12 104387663 to 104387666 3 + TSS region transcription start site region 114869
Tssr114870 12 104387759 to 104387791 32 + TSS region transcription start site region 114870
Gm40561 12 104401802 to 104404168 2366 - lncRNA gene predicted gene, 40561
Tssr114871 12 104406704 to 104406728 24 + TSS region transcription start site region 114871
Serpina3n 12 104406729 to 104414329 7600 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3N
Tssr114872 12 104406733 to 104406754 21 + TSS region transcription start site region 114872
Tssr114873 12 104408885 to 104408912 27 + TSS region transcription start site region 114873
Tssr114874 12 104413470 to 104413483 13 + TSS region transcription start site region 114874
Tssr114875 12 104413603 to 104413616 13 + TSS region transcription start site region 114875
Tssr114876 12 104413639 to 104413657 18 + TSS region transcription start site region 114876
Tssr114877 12 104413674 to 104413702 28 + TSS region transcription start site region 114877
Tssr114878 12 104413768 to 104413779 11 + TSS region transcription start site region 114878
Tssr114879 12 104413822 to 104413862 40 + TSS region transcription start site region 114879
Tssr114880 12 104413872 to 104413879 7 + TSS region transcription start site region 114880
Tssr114881 12 104414057 to 104414076 19 + TSS region transcription start site region 114881
Tssr114882 12 104414080 to 104414101 21 + TSS region transcription start site region 114882
Gm24334 12 104419273 to 104419400 127 - snoRNA gene predicted gene, 24334
Gm40562 12 104433870 to 104440158 6288 + lncRNA gene predicted gene, 40562
Cpgi5024 12 104440138 to 104440421 283 CpG island CpG island 5024
Cpgi5025 12 104446794 to 104447420 626 CpG island CpG island 5025