Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:103392317-103492346

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Otub2 12 103388682 to 103406350 17668 + protein coding gene OTU domain, ubiquitin aldehyde binding 2
Tssr114809 12 103393878 to 103393889 11 + TSS region transcription start site region 114809
9330161L09Rik 12 103406822 to 103407820 998 - unclassified gene RIKEN cDNA 9330161L09 gene
Ddx24 12 103407982 to 103425830 17848 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 24
Gm47260 12 103412492 to 103415596 3104 - unclassified gene predicted gene, 47260
Tssr117477 12 103416223 to 103416243 20 - TSS region transcription start site region 117477
Cpgi5022 12 103425349 to 103426122 773 CpG island CpG island 5022
Tssr117478 12 103425803 to 103425855 52 - TSS region transcription start site region 117478
Gm40560 12 103429650 to 103431451 1801 - lncRNA gene predicted gene, 40560
Ifi27 12 103434211 to 103440239 6028 + protein coding gene interferon, alpha-inducible protein 27
Tssr114810 12 103434214 to 103434281 67 + TSS region transcription start site region 114810
Ifi27l2a 12 103442167 to 103443680 1513 - protein coding gene interferon, alpha-inducible protein 27 like 2A
Tssr114811 12 103442317 to 103442346 29 + TSS region transcription start site region 114811
Tssr117479 12 103442359 to 103442378 19 - TSS region transcription start site region 117479
Tssr117480 12 103443653 to 103443673 20 - TSS region transcription start site region 117480
Ifi27l2b 12 103450898 to 103457223 6325 - protein coding gene interferon, alpha-inducible protein 27 like 2B
Tssr114812 12 103451092 to 103451132 40 + TSS region transcription start site region 114812
Tssr117481 12 103457188 to 103457192 4 - TSS region transcription start site region 117481
Tssr117482 12 103457195 to 103457270 75 - TSS region transcription start site region 117482
Tssr117483 12 103457278 to 103457282 4 - TSS region transcription start site region 117483
Gm47267 12 103483442 to 103486681 3239 + lincRNA gene predicted gene, 47267