Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:102787378-103337379

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Btbd7 12 102780797 to 102878471 97674 - protein coding gene BTB (POZ) domain containing 7
Gm20079 12 102797377 to 102799441 2064 - pseudogene predicted gene, 20079
Tssr117447 12 102818345 to 102818348 3 - TSS region transcription start site region 117447
Gm47167 12 102838108 to 102874891 36783 + antisense lncRNA gene predicted gene, 47167
Tssr117448 12 102855748 to 102855785 37 - TSS region transcription start site region 117448
Gm47166 12 102859741 to 102861449 1708 - unclassified gene predicted gene, 47166
Tssr117449 12 102860300 to 102860302 2 - TSS region transcription start site region 117449
Gm7143 12 102866631 to 102867489 858 - pseudogene predicted gene 7143
Tssr114784 12 102877290 to 102877313 23 + TSS region transcription start site region 114784
Cpgi5014 12 102877302 to 102878868 1566 CpG island CpG island 5014
Tssr117450 12 102878408 to 102878449 41 - TSS region transcription start site region 117450
Tssr117451 12 102878455 to 102878477 22 - TSS region transcription start site region 117451
Cpgi5015 12 102899212 to 102899448 236 CpG island CpG island 5015
Tssr114785 12 102899255 to 102899263 8 + TSS region transcription start site region 114785
Tssr114786 12 102899271 to 102899321 50 + TSS region transcription start site region 114786
Cox8c 12 102899316 to 102900526 1210 + protein coding gene cytochrome c oxidase subunit 8C
Cpgi5016 12 102948777 to 102949920 1143 CpG island CpG island 5016
Tssr114787 12 102948843 to 102948874 31 + TSS region transcription start site region 114787
Unc79 12 102948859 to 103184065 235206 + protein coding gene unc-79 homolog
Tssr114788 12 102949202 to 102949233 31 + TSS region transcription start site region 114788
Tssr114789 12 102949234 to 102949279 45 + TSS region transcription start site region 114789
Tssr114790 12 102949450 to 102949487 37 + TSS region transcription start site region 114790
Tssr114791 12 102954087 to 102954091 4 + TSS region transcription start site region 114791
Gm46372 12 102965900 to 102970012 4112 + lncRNA gene predicted gene, 46372
Gm44324 12 102987829 to 102987963 134 + miRNA gene predicted gene, 44324
Tssr114792 12 102993509 to 102993522 13 + TSS region transcription start site region 114792
D12Mit7 12 102995320 to 102995424 104 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 7
Ath21 12 102995320 to 102995424 104 QTL atherosclerosis 21
D12Mit289 12 103011641 to 103011758 117 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 289
Gm47201 12 103027949 to 103028412 463 - pseudogene predicted gene, 47201
Tssr114793 12 103062378 to 103062379 1 + TSS region transcription start site region 114793
Gm27976 12 103128189 to 103128350 161 + unclassified non-coding RNA gene predicted gene, 27976
D12Mit166 12 103179490 to 103179630 140 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 166
Cpgi5017 12 103189818 to 103190056 238 CpG island CpG island 5017
Prima1 12 103196908 to 103242150 45242 - protein coding gene proline rich membrane anchor 1
Tssr114794 12 103232622 to 103232626 4 + TSS region transcription start site region 114794
Tssr117452 12 103236016 to 103236041 25 - TSS region transcription start site region 117452
Cpgi5018 12 103241522 to 103243053 1531 CpG island CpG island 5018
Tssr117453 12 103242143 to 103242148 5 - TSS region transcription start site region 117453
D12Mit99 12 103273040 to 103273190 150 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 99
Tssr114795 12 103311010 to 103311030 20 + TSS region transcription start site region 114795
Fam181a 12 103311021 to 103317067 6046 + protein coding gene family with sequence similarity 181, member A
Gm29508 12 103312368 to 103314769 2401 - antisense lncRNA gene predicted gene 29508
Tssr117454 12 103314757 to 103314773 16 - TSS region transcription start site region 117454
Cpgi5019 12 103314842 to 103315448 606 CpG island CpG island 5019
Tssr114796 12 103314857 to 103314892 35 + TSS region transcription start site region 114796
Tssr114797 12 103314944 to 103314962 18 + TSS region transcription start site region 114797
Tssr114798 12 103314967 to 103314974 7 + TSS region transcription start site region 114798
Tssr114799 12 103314978 to 103314989 11 + TSS region transcription start site region 114799
Asb2 12 103321142 to 103356001 34859 - protein coding gene ankyrin repeat and SOCS box-containing 2
Cpgi5020 12 103324834 to 103325908 1074 CpG island CpG island 5020
Tssr117455 12 103326926 to 103326929 3 - TSS region transcription start site region 117455
Tssr117456 12 103336086 to 103336111 25 - TSS region transcription start site region 117456
Tssr117457 12 103336143 to 103336156 13 - TSS region transcription start site region 117457
Tssr117458 12 103336293 to 103336304 11 - TSS region transcription start site region 117458
Tssr117459 12 103336379 to 103336421 42 - TSS region transcription start site region 117459
Tssr114800 12 103336855 to 103336882 27 + TSS region transcription start site region 114800
Tssr114801 12 103336888 to 103336899 11 + TSS region transcription start site region 114801
Tssr117460 12 103336892 to 103336911 19 - TSS region transcription start site region 117460
Gm15523 12 103336906 to 103348057 11151 + antisense lncRNA gene predicted gene 15523
Tssr117461 12 103336917 to 103336936 19 - TSS region transcription start site region 117461
Tssr117462 12 103336937 to 103336959 22 - TSS region transcription start site region 117462
Tssr114802 12 103337112 to 103337121 9 + TSS region transcription start site region 114802