Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:102228118-102398148

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc24a4 12 102128733 to 102267091 138358 + protein coding gene solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
Gm25203 12 102253473 to 102253687 214 - snoRNA gene predicted gene, 25203
Tssr117394 12 102253685 to 102253687 2 - TSS region transcription start site region 117394
C030009J22Rik 12 102270390 to 102272490 2100 unclassified gene RIKEN cDNA C030009J22 gene
Tssr114736 12 102270415 to 102270417 2 + TSS region transcription start site region 114736
Cpgi5004 12 102282668 to 102283793 1125 CpG island CpG island 5004
Tssr114737 12 102282861 to 102282871 10 + TSS region transcription start site region 114737
Tssr114738 12 102283036 to 102283079 43 + TSS region transcription start site region 114738
Rin3 12 102283048 to 102390855 107807 + protein coding gene Ras and Rab interactor 3
Tssr3924 12 102283078 to 102283098 20 - TSS region transcription start site region 3924
Tssr114739 12 102283087 to 102283096 9 + TSS region transcription start site region 114739
Tssr114740 12 102283116 to 102283194 78 + TSS region transcription start site region 114740
Tssr114741 12 102283203 to 102283234 31 + TSS region transcription start site region 114741
Tssr114742 12 102283256 to 102283274 18 + TSS region transcription start site region 114742
D12Mit180 12 102298104 to 102298236 132 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 180
Tssr117395 12 102302405 to 102302415 10 - TSS region transcription start site region 117395
Tssr114743 12 102313118 to 102313148 30 + TSS region transcription start site region 114743
Tssr114744 12 102354745 to 102354754 9 + TSS region transcription start site region 114744
Tssr114745 12 102354759 to 102354821 62 + TSS region transcription start site region 114745
Tssr117396 12 102356857 to 102356871 14 - TSS region transcription start site region 117396
Tssr114746 12 102357129 to 102357152 23 + TSS region transcription start site region 114746
E030047P09Rik 12 102364469 to 102367127 2658 unclassified gene RIKEN cDNA E030047P09 gene
Tssr114747 12 102367367 to 102367390 23 + TSS region transcription start site region 114747
Tssr117397 12 102368159 to 102368162 3 - TSS region transcription start site region 117397
Tssr114748 12 102368248 to 102368258 10 + TSS region transcription start site region 114748
Tssr114749 12 102368281 to 102368321 40 + TSS region transcription start site region 114749
Tssr114750 12 102368346 to 102368372 26 + TSS region transcription start site region 114750
Tssr114751 12 102368732 to 102368761 29 + TSS region transcription start site region 114751
Tssr114752 12 102368915 to 102368936 21 + TSS region transcription start site region 114752
Tssr114753 12 102377163 to 102377164 1 + TSS region transcription start site region 114753
Tssr114754 12 102383879 to 102383939 60 + TSS region transcription start site region 114754
Cpgi5005 12 102389816 to 102390134 318 CpG island CpG island 5005
Tssr114755 12 102391349 to 102391351 2 + TSS region transcription start site region 114755
Lgmn 12 102394082 to 102439808 45726 - protein coding gene legumain
Tssr117398 12 102395676 to 102395711 35 - TSS region transcription start site region 117398