Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:101840725-102110751

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trip11 12 101834043 to 101913171 79128 - protein coding gene thyroid hormone receptor interactor 11
Gm20701 12 101866949 to 101867295 346 + pseudogene predicted gene 20701
Tssr117378 12 101880538 to 101880550 12 - TSS region transcription start site region 117378
Tssr117379 12 101886940 to 101886955 15 - TSS region transcription start site region 117379
Gm20702 12 101906080 to 101906539 459 + pseudogene predicted gene 20702
Cpgi4999 12 101912414 to 101913495 1081 CpG island CpG island 4999
Tssr117380 12 101913116 to 101913161 45 - TSS region transcription start site region 117380
Gm20036 12 101913240 to 101915335 2095 + unclassified non-coding RNA gene predicted gene, 20036
Atxn3 12 101918901 to 101958243 39342 - protein coding gene ataxin 3
Cpgi5000 12 101957762 to 101958468 706 CpG island CpG island 5000
Tssr117381 12 101958161 to 101958212 51 - TSS region transcription start site region 117381
Ndufb1-ps 12 101968099 to 101977063 8964 - bidirectional promoter lncRNA gene NADH:ubiquinone oxidoreductase subunit B1
Tssr117382 12 101971850 to 101971863 13 - TSS region transcription start site region 117382
Cpgi5001 12 101975339 to 101976523 1184 CpG island CpG island 5001
Tssr114729 12 101975366 to 101975371 5 + TSS region transcription start site region 114729
Tssr117383 12 101975683 to 101975746 63 - TSS region transcription start site region 117383
Tssr114730 12 101975725 to 101975751 26 + TSS region transcription start site region 114730
Cpsf2 12 101975764 to 102005993 30229 + protein coding gene cleavage and polyadenylation specific factor 2
Tssr117384 12 101975765 to 101975776 11 - TSS region transcription start site region 117384
Tssr3923 12 101975883 to 101975886 3 - TSS region transcription start site region 3923
Tssr117385 12 101975913 to 101975924 11 - TSS region transcription start site region 117385
Tssr117386 12 101975935 to 101975946 11 - TSS region transcription start site region 117386
Tssr114731 12 101975965 to 101976004 39 + TSS region transcription start site region 114731
Tssr117387 12 101975979 to 101975984 5 - TSS region transcription start site region 117387
Tssr114732 12 101976006 to 101976017 11 + TSS region transcription start site region 114732
Tssr117388 12 101976023 to 101976035 12 - TSS region transcription start site region 117388
Tssr117389 12 101976204 to 101976248 44 - TSS region transcription start site region 117389
Tssr117390 12 101976265 to 101976279 14 - TSS region transcription start site region 117390
Tssr117391 12 101976282 to 101976301 19 - TSS region transcription start site region 117391
Tssr117392 12 101976877 to 101976887 10 - TSS region transcription start site region 117392
Tssr117393 12 101976897 to 101976914 17 - TSS region transcription start site region 117393
Tssr114733 12 102005534 to 102005582 48 + TSS region transcription start site region 114733