Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:101820965-102131004

Filter by:
39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trip11 12 101834043 to 101913171 79128 - protein coding gene thyroid hormone receptor interactor 11
Tssr117377 12 101837520 to 101837537 17 - TSS region transcription start site region 117377
Gm20701 12 101866949 to 101867295 346 + pseudogene predicted gene 20701
Tssr117378 12 101880538 to 101880550 12 - TSS region transcription start site region 117378
Tssr117379 12 101886940 to 101886955 15 - TSS region transcription start site region 117379
Gm20702 12 101906080 to 101906539 459 + pseudogene predicted gene 20702
Cpgi4999 12 101912414 to 101913495 1081 CpG island CpG island 4999
Tssr117380 12 101913116 to 101913161 45 - TSS region transcription start site region 117380
Gm20036 12 101913240 to 101915335 2095 + unclassified non-coding RNA gene predicted gene, 20036
Atxn3 12 101918901 to 101958243 39342 - protein coding gene ataxin 3
Cpgi5000 12 101957762 to 101958468 706 CpG island CpG island 5000
Tssr117381 12 101958161 to 101958212 51 - TSS region transcription start site region 117381
Ndufb1-ps 12 101968099 to 101977063 8964 - bidirectional promoter lncRNA gene NADH:ubiquinone oxidoreductase subunit B1
Tssr117382 12 101971850 to 101971863 13 - TSS region transcription start site region 117382
Cpgi5001 12 101975339 to 101976523 1184 CpG island CpG island 5001
Tssr114729 12 101975366 to 101975371 5 + TSS region transcription start site region 114729
Tssr117383 12 101975683 to 101975746 63 - TSS region transcription start site region 117383
Tssr114730 12 101975725 to 101975751 26 + TSS region transcription start site region 114730
Cpsf2 12 101975764 to 102005993 30229 + protein coding gene cleavage and polyadenylation specific factor 2
Tssr117384 12 101975765 to 101975776 11 - TSS region transcription start site region 117384
Tssr3923 12 101975883 to 101975886 3 - TSS region transcription start site region 3923
Tssr117385 12 101975913 to 101975924 11 - TSS region transcription start site region 117385
Tssr117386 12 101975935 to 101975946 11 - TSS region transcription start site region 117386
Tssr114731 12 101975965 to 101976004 39 + TSS region transcription start site region 114731
Tssr117387 12 101975979 to 101975984 5 - TSS region transcription start site region 117387
Tssr114732 12 101976006 to 101976017 11 + TSS region transcription start site region 114732
Tssr117388 12 101976023 to 101976035 12 - TSS region transcription start site region 117388
Tssr117389 12 101976204 to 101976248 44 - TSS region transcription start site region 117389
Tssr117390 12 101976265 to 101976279 14 - TSS region transcription start site region 117390
Tssr117391 12 101976282 to 101976301 19 - TSS region transcription start site region 117391
Tssr117392 12 101976877 to 101976887 10 - TSS region transcription start site region 117392
Tssr117393 12 101976897 to 101976914 17 - TSS region transcription start site region 117393
Tssr114733 12 102005534 to 102005582 48 + TSS region transcription start site region 114733
Gm16339 12 102127806 to 102129906 2100 - antisense lncRNA gene predicted gene 16339
Cpgi5002 12 102128169 to 102128358 189 CpG island CpG island 5002
Cpgi5003 12 102128596 to 102129810 1214 CpG island CpG island 5003
Tssr114734 12 102128718 to 102128739 21 + TSS region transcription start site region 114734
Slc24a4 12 102128733 to 102267091 138358 + protein coding gene solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
Tssr114735 12 102129019 to 102129049 30 + TSS region transcription start site region 114735