Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 12:100892970-101092973

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41 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpr68 12 100876682 to 100908198 31516 - protein coding gene G protein-coupled receptor 68
Gm36572 12 100890439 to 100909099 18660 + lncRNA gene predicted gene, 36572
Gm53034 12 100897275 to 100897415 140 + pseudogene predicted gene, 53034
Tssr114719 12 100898464 to 100898500 36 + TSS region transcription start site region 114719
Cpgi4991 12 100898877 to 100899701 824 CpG island CpG island 4991
Tssr117337 12 100899359 to 100899385 26 - TSS region transcription start site region 117337
Tssr117338 12 100899436 to 100899448 12 - TSS region transcription start site region 117338
Tssr117339 12 100899544 to 100899581 37 - TSS region transcription start site region 117339
Cpgi4992 12 100907670 to 100908316 646 CpG island CpG island 4992
Tssr117340 12 100908190 to 100908220 30 - TSS region transcription start site region 117340
Ccdc88c 12 100911523 to 101029056 117533 - protein coding gene coiled-coil domain containing 88C
Tssr117341 12 100923590 to 100923595 5 - TSS region transcription start site region 117341
A630072L19Rik 12 100938104 to 100944220 6116 + lncRNA gene RIKEN cDNA A630072L19 gene
Cpgi4993 12 100944867 to 100945075 208 CpG island CpG island 4993
Tssr117342 12 100978089 to 100978129 40 - TSS region transcription start site region 117342
Gm36756 12 100986623 to 101014822 28199 + lncRNA gene predicted gene, 36756
Tssr114720 12 100986627 to 100986632 5 + TSS region transcription start site region 114720
Tssr114721 12 100992970 to 100992973 3 + TSS region transcription start site region 114721
Tssr114722 12 101007658 to 101007673 15 + TSS region transcription start site region 114722
Tssr117343 12 101016122 to 101016148 26 - TSS region transcription start site region 117343
Mir1190 12 101021673 to 101021768 95 - miRNA gene microRNA 1190
Cpgi4994 12 101028255 to 101029656 1401 CpG island CpG island 4994
Tssr117344 12 101028844 to 101028913 69 - TSS region transcription start site region 117344
Tssr117345 12 101029016 to 101029042 26 - TSS region transcription start site region 117345
Tssr117346 12 101029059 to 101029087 28 - TSS region transcription start site region 117346
Gm47639 12 101039092 to 101042808 3716 + lncRNA gene predicted gene, 47639
Ppp4r3a 12 101039409 to 101083702 44293 - protein coding gene protein phosphatase 4 regulatory subunit 3A
Tssr117347 12 101040070 to 101040090 20 - TSS region transcription start site region 117347
Tssr117348 12 101040129 to 101040133 4 - TSS region transcription start site region 117348
Tssr117349 12 101058728 to 101058739 11 - TSS region transcription start site region 117349
Tssr117350 12 101066410 to 101066414 4 - TSS region transcription start site region 117350
Tssr117351 12 101073540 to 101073544 4 - TSS region transcription start site region 117351
Cpgi4995 12 101082435 to 101084238 1803 CpG island CpG island 4995
D130020L05Rik 12 101082451 to 101088927 6476 + lncRNA gene RIKEN cDNA D130020L05 gene
Tssr114723 12 101082939 to 101082973 34 + TSS region transcription start site region 114723
Tssr117352 12 101083449 to 101083487 38 - TSS region transcription start site region 117352
Tssr117353 12 101083575 to 101083611 36 - TSS region transcription start site region 117353
Tssr117354 12 101083653 to 101083717 64 - TSS region transcription start site region 117354
Tssr114724 12 101083712 to 101083743 31 + TSS region transcription start site region 114724
Tssr114725 12 101083756 to 101083802 46 + TSS region transcription start site region 114725
Tssr114726 12 101083806 to 101083832 26 + TSS region transcription start site region 114726