Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:100185770-100635822

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48296 12 100187011 to 100187705 694 + unclassified gene predicted gene, 48296
Cpgi4986 12 100187040 to 100188008 968 CpG island CpG island 4986
Tssr114691 12 100187105 to 100187123 18 + TSS region transcription start site region 114691
Tssr117317 12 100187436 to 100187448 12 - TSS region transcription start site region 117317
Tssr114692 12 100187676 to 100187718 42 + TSS region transcription start site region 114692
Gm10433 12 100187968 to 100193538 5570 + lncRNA gene predicted gene 10433
Cpgi4987 12 100199001 to 100201096 2095 CpG island CpG island 4987
Calm1 12 100199435 to 100209814 10379 + protein coding gene calmodulin 1
Tssr114693 12 100199509 to 100199514 5 + TSS region transcription start site region 114693
Tssr114694 12 100199519 to 100199538 19 + TSS region transcription start site region 114694
Tssr114695 12 100199547 to 100199552 5 + TSS region transcription start site region 114695
Tssr114696 12 100199561 to 100199578 17 + TSS region transcription start site region 114696
Tssr114697 12 100199594 to 100199598 4 + TSS region transcription start site region 114697
Tssr114698 12 100203608 to 100203622 14 + TSS region transcription start site region 114698
Tssr114699 12 100203633 to 100203673 40 + TSS region transcription start site region 114699
Tssr117318 12 100203693 to 100203724 31 - TSS region transcription start site region 117318
Tssr114700 12 100205608 to 100205661 53 + TSS region transcription start site region 114700
Tssr117319 12 100205661 to 100205701 40 - TSS region transcription start site region 117319
Tssr114701 12 100206092 to 100206109 17 + TSS region transcription start site region 114701
Tssr114702 12 100206114 to 100206139 25 + TSS region transcription start site region 114702
Tssr114703 12 100206148 to 100206165 17 + TSS region transcription start site region 114703
Tssr117320 12 100206157 to 100206231 74 - TSS region transcription start site region 117320
Tssr114704 12 100206425 to 100206459 34 + TSS region transcription start site region 114704
Tssr117321 12 100206486 to 100206501 15 - TSS region transcription start site region 117321
Tssr114705 12 100206539 to 100206578 39 + TSS region transcription start site region 114705
Tssr114706 12 100206601 to 100206636 35 + TSS region transcription start site region 114706
Tssr114707 12 100206711 to 100206766 55 + TSS region transcription start site region 114707
Tssr114708 12 100207372 to 100207388 16 + TSS region transcription start site region 114708
Tssr114709 12 100207569 to 100207586 17 + TSS region transcription start site region 114709
Tssr114710 12 100208224 to 100208239 15 + TSS region transcription start site region 114710
Gm26723 12 100208988 to 100209814 826 - lincRNA gene predicted gene, 26723
Gm40557 12 100238009 to 100242260 4251 - lincRNA gene predicted gene, 40557
Tssr117322 12 100239527 to 100239564 37 - TSS region transcription start site region 117322
Gm10432 12 100276609 to 100300908 24299 + lncRNA gene predicted gene 10432
Ttc7b 12 100300770 to 100520822 220052 - protein coding gene tetratricopeptide repeat domain 7B
Gm48382 12 100366078 to 100369752 3674 - unclassified gene predicted gene, 48382
Gm48381 12 100440697 to 100444660 3963 - unclassified gene predicted gene, 48381
Tssr117323 12 100447290 to 100447291 1 - TSS region transcription start site region 117323
Gm48383 12 100465039 to 100488390 23351 + antisense lncRNA gene predicted gene, 48383
Gm36375 12 100487660 to 100493910 6250 - protein coding gene predicted gene, 36375
Cpgi4988 12 100499547 to 100499763 216 CpG island CpG island 4988
D12Mit98 12 100500769 to 100500902 133 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 98
Cpgi4989 12 100519902 to 100521353 1451 CpG island CpG island 4989
Tssr117324 12 100520778 to 100520853 75 - TSS region transcription start site region 117324
Rps6ka5 12 100549778 to 100725395 175617 - protein coding gene ribosomal protein S6 kinase, polypeptide 5
Insq10 12 100565816 to 100565965 149 QTL insulin QTL 10
Ssrq6 12 100565816 to 102495006 1929190 QTL stress response QTL 6
D12Mit231 12 100565816 to 100565965 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 231
Dbsty3 12 100565816 to 100565965 149 QTL diabesity 3
Tssr3920 12 100569859 to 100569860 1 + TSS region transcription start site region 3920
Gm49703 12 100571908 to 100573976 2068 - unclassified gene predicted gene, 49703
Gm48586 12 100621676 to 100623733 2057 - unclassified gene predicted gene, 48586
Gm48585 12 100624785 to 100626793 2008 - unclassified gene predicted gene, 48585