MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:100116520-100196537

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Psmc1	12	100110202 to 100123364	13162	+	protein coding gene	protease (prosome, macropain) 26S subunit, ATPase 1
Nrde2	12	100125452 to 100159653	34201	-	protein coding gene	nrde-2 necessary for RNA interference, domain containing
Tssr3919	12	100134457 to 100134470	13	-	TSS region	transcription start site region 3919
Tssr114689	12	100156520 to 100156537	17	+	TSS region	transcription start site region 114689
Cpgi4985	12	100159299 to 100159763	464		CpG island	CpG island 4985
Tssr117314	12	100159601 to 100159672	71	-	TSS region	transcription start site region 117314
D12Mit97	12	100174644 to 100174823	179		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 97
Gm36263	12	100174851 to 100181263	6412	-	lncRNA gene	predicted gene, 36263
Tssr117315	12	100179010 to 100179011	1	-	TSS region	transcription start site region 117315
Tssr117316	12	100180953 to 100180976	23	-	TSS region	transcription start site region 117316
Tssr114690	12	100184226 to 100184250	24	+	TSS region	transcription start site region 114690
Gm48296	12	100187011 to 100187705	694	+	unclassified gene	predicted gene, 48296
Cpgi4986	12	100187040 to 100188008	968		CpG island	CpG island 4986
Tssr114691	12	100187105 to 100187123	18	+	TSS region	transcription start site region 114691
Tssr117317	12	100187436 to 100187448	12	-	TSS region	transcription start site region 117317
Tssr114692	12	100187676 to 100187718	42	+	TSS region	transcription start site region 114692
Gm10433	12	100187968 to 100193538	5570	+	lncRNA gene	predicted gene 10433