Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:100085452-100199653

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930477G07Rik 12 100076908 to 100097218 20310 - lincRNA gene RIKEN cDNA 4930477G07 gene
Cpgi4984 12 100110020 to 100110915 895 CpG island CpG island 4984
Tssr114688 12 100110148 to 100110193 45 + TSS region transcription start site region 114688
Psmc1 12 100110202 to 100123364 13162 + protein coding gene protease (prosome, macropain) 26S subunit, ATPase 1
Nrde2 12 100125452 to 100159653 34201 - protein coding gene nrde-2 necessary for RNA interference, domain containing
Tssr3919 12 100134457 to 100134470 13 - TSS region transcription start site region 3919
Tssr114689 12 100156520 to 100156537 17 + TSS region transcription start site region 114689
Cpgi4985 12 100159299 to 100159763 464 CpG island CpG island 4985
Tssr117314 12 100159601 to 100159672 71 - TSS region transcription start site region 117314
D12Mit97 12 100174644 to 100174823 179 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 97
Gm36263 12 100174851 to 100181263 6412 - lncRNA gene predicted gene, 36263
Tssr117315 12 100179010 to 100179011 1 - TSS region transcription start site region 117315
Tssr117316 12 100180953 to 100180976 23 - TSS region transcription start site region 117316
Tssr114690 12 100184226 to 100184250 24 + TSS region transcription start site region 114690
Gm48296 12 100187011 to 100187705 694 + unclassified gene predicted gene, 48296
Cpgi4986 12 100187040 to 100188008 968 CpG island CpG island 4986
Tssr114691 12 100187105 to 100187123 18 + TSS region transcription start site region 114691
Tssr117317 12 100187436 to 100187448 12 - TSS region transcription start site region 117317
Tssr114692 12 100187676 to 100187718 42 + TSS region transcription start site region 114692
Gm10433 12 100187968 to 100193538 5570 + lncRNA gene predicted gene 10433
Cpgi4987 12 100199001 to 100201096 2095 CpG island CpG island 4987
Calm1 12 100199435 to 100209814 10379 + protein coding gene calmodulin 1
Tssr114693 12 100199509 to 100199514 5 + TSS region transcription start site region 114693
Tssr114694 12 100199519 to 100199538 19 + TSS region transcription start site region 114694
Tssr114695 12 100199547 to 100199552 5 + TSS region transcription start site region 114695
Tssr114696 12 100199561 to 100199578 17 + TSS region transcription start site region 114696
Tssr114697 12 100199594 to 100199598 4 + TSS region transcription start site region 114697