Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:100050202-100183364

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit30 12 100056744 to 100056850 106 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 30
Ccs1 12 100056850 to 90920648 -9136202 QTL colon cancer susceptibility 1
Kcnk13 12 100062682 to 99964499 -98183 + protein coding gene potassium channel, subfamily K, member 13
Tssr114687 12 100072436 to 100072443 7 + TSS region transcription start site region 114687
4930477G07Rik 12 100076908 to 100097218 20310 - lincRNA gene RIKEN cDNA 4930477G07 gene
9530050K03Rik 12 100079490 to 100080395 905 - pseudogene RIKEN cDNA 9530050K03 gene
Cpgi4984 12 100110020 to 100110915 895 CpG island CpG island 4984
Tssr114688 12 100110148 to 100110193 45 + TSS region transcription start site region 114688
Psmc1 12 100110202 to 100123364 13162 + protein coding gene protease (prosome, macropain) 26S subunit, ATPase 1
Nrde2 12 100125452 to 100159653 34201 - protein coding gene nrde-2 necessary for RNA interference, domain containing
Tssr3919 12 100134457 to 100134470 13 - TSS region transcription start site region 3919
Tssr114689 12 100156520 to 100156537 17 + TSS region transcription start site region 114689
Cpgi4985 12 100159299 to 100159763 464 CpG island CpG island 4985
Tssr117314 12 100159601 to 100159672 71 - TSS region transcription start site region 117314
D12Mit97 12 100174644 to 100174823 179 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 97
Gm36263 12 100174851 to 100181263 6412 - lncRNA gene predicted gene, 36263
Tssr117315 12 100179010 to 100179011 1 - TSS region transcription start site region 117315
Tssr117316 12 100180953 to 100180976 23 - TSS region transcription start site region 117316