Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:99159047-99281017

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abbp4 11 88808762 to 99190771 10382009 QTL A/J and C57BL/6 blood pressure 4
Tssr110631 11 99168007 to 99168038 31 - TSS region transcription start site region 110631
Tssr104860 11 99168125 to 99168159 34 + TSS region transcription start site region 104860
Gm32249 11 99168148 to 99171760 3612 + lncRNA gene predicted gene, 32249
Tssr104861 11 99168304 to 99168327 23 + TSS region transcription start site region 104861
Tssr104862 11 99168331 to 99168356 25 + TSS region transcription start site region 104862
Tssr104863 11 99168363 to 99168376 13 + TSS region transcription start site region 104863
Tssr104864 11 99168397 to 99168414 17 + TSS region transcription start site region 104864
Tssr104865 11 99168526 to 99168535 9 + TSS region transcription start site region 104865
Tssr110632 11 99170829 to 99170839 10 - TSS region transcription start site region 110632
Tssr104866 11 99171113 to 99171124 11 + TSS region transcription start site region 104866
D11Mit124 11 99190655 to 99190771 116 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 124
Tssr110633 11 99200087 to 99200119 32 - TSS region transcription start site region 110633
Smarce1 11 99209047 to 99231017 21970 - protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Tssr110634 11 99209511 to 99209537 26 - TSS region transcription start site region 110634
Tssr110635 11 99209993 to 99209999 6 - TSS region transcription start site region 110635
Cpgi3789 11 99229960 to 99231201 1241 CpG island CpG island 3789
Tssr110636 11 99230430 to 99230464 34 - TSS region transcription start site region 110636
Tssr110637 11 99230688 to 99230704 16 - TSS region transcription start site region 110637
Tssr110638 11 99230890 to 99230901 11 - TSS region transcription start site region 110638
Tssr110639 11 99230919 to 99230959 40 - TSS region transcription start site region 110639
Tssr110640 11 99230966 to 99230988 22 - TSS region transcription start site region 110640
Tssr110641 11 99230998 to 99231019 21 - TSS region transcription start site region 110641
Krt222 11 99232761 to 99244085 11324 - protein coding gene keratin 222
Cpgi3790 11 99238485 to 99238750 265 CpG island CpG island 3790
D11Mit249 11 99241471 to 99241580 109 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 249
Gm32385 11 99243895 to 99304714 60819 + lncRNA gene predicted gene, 32385
Cpgi3791 11 99243953 to 99244135 182 CpG island CpG island 3791
Tssr110642 11 99244058 to 99244136 78 - TSS region transcription start site region 110642
Krt24 11 99280093 to 99285238 5145 - protein coding gene keratin 24
Tssr104867 11 99280223 to 99280251 28 + TSS region transcription start site region 104867