Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:98843638-98925040

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rapgefl1	11	98836785 to 98853009	16224	+	protein coding gene	Rap guanine nucleotide exchange factor (GEF)-like 1
Tssr104806	11	98843798 to 98843800	2	+	TSS region	transcription start site region 104806
Cpgi3776	11	98845911 to 98846280	369		CpG island	CpG island 3776
Cpgi3777	11	98849063 to 98849475	412		CpG island	CpG island 3777
Cpgi3778	11	98863337 to 98864524	1187		CpG island	CpG island 3778
Tssr104807	11	98863610 to 98863646	36	+	TSS region	transcription start site region 104807
Wipf2	11	98863638 to 98905040	41402	+	protein coding gene	WAS/WASL interacting protein family, member 2
Tssr104808	11	98863655 to 98863690	35	+	TSS region	transcription start site region 104808
Tssr104809	11	98863755 to 98863785	30	+	TSS region	transcription start site region 104809
Gm23640	11	98870396 to 98870499	103	-	snRNA gene	predicted gene, 23640
Tssr104810	11	98891183 to 98891201	18	+	TSS region	transcription start site region 104810
Tssr104811	11	98903201 to 98903214	13	+	TSS region	transcription start site region 104811
Cpgi3779	11	98907489 to 98908217	728		CpG island	CpG island 3779
Cdc6	11	98907801 to 98923940	16139	+	protein coding gene	cell division cycle 6
Tssr104812	11	98907810 to 98907824	14	+	TSS region	transcription start site region 104812
Tssr104813	11	98907827 to 98907866	39	+	TSS region	transcription start site region 104813
Tssr104814	11	98918661 to 98918690	29	+	TSS region	transcription start site region 104814
Carg4	11	98919441 to 98919441	0		QTL	Candida albicans resistance gene 4