MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:98828610-98898646

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Casc3	11	98809808 to 98833807	23999	+	protein coding gene	cancer susceptibility candidate 3
Tssr104801	11	98832534 to 98832551	17	+	TSS region	transcription start site region 104801
Cpgi3775	11	98836588 to 98837612	1024		CpG island	CpG island 3775
Tssr104802	11	98836762 to 98836771	9	+	TSS region	transcription start site region 104802
Tssr104803	11	98836775 to 98836831	56	+	TSS region	transcription start site region 104803
Rapgefl1	11	98836785 to 98853009	16224	+	protein coding gene	Rap guanine nucleotide exchange factor (GEF)-like 1
Tssr104804	11	98836836 to 98836859	23	+	TSS region	transcription start site region 104804
Tssr104805	11	98836867 to 98836878	11	+	TSS region	transcription start site region 104805
Tssr104806	11	98843798 to 98843800	2	+	TSS region	transcription start site region 104806
Cpgi3776	11	98845911 to 98846280	369		CpG island	CpG island 3776
Cpgi3777	11	98849063 to 98849475	412		CpG island	CpG island 3777
Cpgi3778	11	98863337 to 98864524	1187		CpG island	CpG island 3778
Tssr104807	11	98863610 to 98863646	36	+	TSS region	transcription start site region 104807
Wipf2	11	98863638 to 98905040	41402	+	protein coding gene	WAS/WASL interacting protein family, member 2
Tssr104808	11	98863655 to 98863690	35	+	TSS region	transcription start site region 104808
Tssr104809	11	98863755 to 98863785	30	+	TSS region	transcription start site region 104809
Gm23640	11	98870396 to 98870499	103	-	snRNA gene	predicted gene, 23640
Tssr104810	11	98891183 to 98891201	18	+	TSS region	transcription start site region 104810