Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:98786588-98887612

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3772 11 98789265 to 98789563 298 CpG island CpG island 3772
Cpgi3773 11 98794538 to 98796696 2158 CpG island CpG island 3773
Tssr104789 11 98795171 to 98795209 38 + TSS region transcription start site region 104789
Tssr104790 11 98795237 to 98795254 17 + TSS region transcription start site region 104790
Tssr104791 11 98795469 to 98795483 14 + TSS region transcription start site region 104791
Tssr104792 11 98795495 to 98795574 79 + TSS region transcription start site region 104792
Msl1 11 98795516 to 98807859 12343 + protein coding gene male specific lethal 1
Tssr104793 11 98795821 to 98795840 19 + TSS region transcription start site region 104793
Gm12359 11 98798309 to 98810089 11780 - antisense lncRNA gene predicted gene 12359
Tssr104794 11 98798606 to 98798613 7 + TSS region transcription start site region 104794
Tssr104795 11 98798653 to 98798664 11 + TSS region transcription start site region 104795
Tssr104796 11 98798674 to 98798675 1 + TSS region transcription start site region 104796
Tssr104797 11 98798702 to 98798711 9 + TSS region transcription start site region 104797
Tssr104798 11 98799200 to 98799215 15 + TSS region transcription start site region 104798
Cpgi3774 11 98809494 to 98810429 935 CpG island CpG island 3774
Tssr104799 11 98809787 to 98809810 23 + TSS region transcription start site region 104799
Casc3 11 98809808 to 98833807 23999 + protein coding gene cancer susceptibility candidate 3
Tssr104800 11 98809811 to 98809864 53 + TSS region transcription start site region 104800
Tssr110603 11 98810079 to 98810102 23 - TSS region transcription start site region 110603
Tssr104801 11 98832534 to 98832551 17 + TSS region transcription start site region 104801
Cpgi3775 11 98836588 to 98837612 1024 CpG island CpG island 3775
Tssr104802 11 98836762 to 98836771 9 + TSS region transcription start site region 104802
Tssr104803 11 98836775 to 98836831 56 + TSS region transcription start site region 104803
Rapgefl1 11 98836785 to 98853009 16224 + protein coding gene Rap guanine nucleotide exchange factor (GEF)-like 1
Tssr104804 11 98836836 to 98836859 23 + TSS region transcription start site region 104804
Tssr104805 11 98836867 to 98836878 11 + TSS region transcription start site region 104805
Tssr104806 11 98843798 to 98843800 2 + TSS region transcription start site region 104806
Cpgi3776 11 98845911 to 98846280 369 CpG island CpG island 3776
Cpgi3777 11 98849063 to 98849475 412 CpG island CpG island 3777
Cpgi3778 11 98863337 to 98864524 1187 CpG island CpG island 3778
Tssr104807 11 98863610 to 98863646 36 + TSS region transcription start site region 104807
Wipf2 11 98863638 to 98905040 41402 + protein coding gene WAS/WASL interacting protein family, member 2
Tssr104808 11 98863655 to 98863690 35 + TSS region transcription start site region 104808
Tssr104809 11 98863755 to 98863785 30 + TSS region transcription start site region 104809
Gm23640 11 98870396 to 98870499 103 - snRNA gene predicted gene, 23640