Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:98589391-98739400

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc3c 11 98598291 to 98599586 1295 + protein coding gene leucine rich repeat containing 3C
Cpgi3764 11 98598829 to 98599631 802 CpG island CpG island 3764
Gm12355 11 98624368 to 98625662 1294 - protein coding gene predicted gene 12355
Tssr104755 11 98626344 to 98626349 5 + TSS region transcription start site region 104755
Gsdma3 11 98626360 to 98638226 11866 + protein coding gene gasdermin A3
D11Mit264 11 98645606 to 98645724 118 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 264
Tssr104756 11 98646755 to 98646772 17 + TSS region transcription start site region 104756
Gsdma2 11 98646759 to 98657964 11205 + protein coding gene gasdermin A2
Tssr104757 11 98664341 to 98664356 15 + TSS region transcription start site region 104757
Gsdma 11 98664351 to 98677708 13357 + protein coding gene gasdermin A
Tssr104758 11 98664360 to 98664373 13 + TSS region transcription start site region 104758
Tssr104759 11 98664391 to 98664400 9 + TSS region transcription start site region 104759
D11Mit197 11 98678047 to 98678193 146 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 197
Cpgi3765 11 98682130 to 98683241 1111 CpG island CpG island 3765
Psmd3 11 98682554 to 98695978 13424 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
Tssr104760 11 98682558 to 98682573 15 + TSS region transcription start site region 104760
Tssr104761 11 98682578 to 98682612 34 + TSS region transcription start site region 104761
Tssr104762 11 98682613 to 98682624 11 + TSS region transcription start site region 104762
Tssr104763 11 98682788 to 98682818 30 + TSS region transcription start site region 104763
Gm12356 11 98682921 to 98683415 494 - unclassified non-coding RNA gene predicted gene 12356
Tssr110579 11 98683409 to 98683418 9 - TSS region transcription start site region 110579
Crhq1 11 98683655 to 98683810 155 QTL compensatory renal hypertrophy QTL 1
D11Mit14 11 98683655 to 98683810 155 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 14
Skull16 11 98683655 to 98683810 155 QTL skull morphology 16
Tssr104764 11 98685509 to 98685523 14 + TSS region transcription start site region 104764
Tssr104765 11 98685892 to 98685901 9 + TSS region transcription start site region 104765
Tssr104766 11 98685905 to 98685914 9 + TSS region transcription start site region 104766
Tssr104767 11 98685916 to 98685926 10 + TSS region transcription start site region 104767
Tssr104768 11 98686004 to 98686018 14 + TSS region transcription start site region 104768
Tssr104769 11 98690524 to 98690538 14 + TSS region transcription start site region 104769
Gm38985 11 98696060 to 98701655 5595 - lncRNA gene predicted gene, 38985
Tssr104770 11 98700165 to 98700206 41 + TSS region transcription start site region 104770
Tssr104771 11 98700332 to 98700370 38 + TSS region transcription start site region 104771
Csf3 11 98701263 to 98703629 2366 + protein coding gene colony stimulating factor 3 (granulocyte)
Tssr104772 11 98701342 to 98701346 4 + TSS region transcription start site region 104772
Med24 11 98704591 to 98729435 24844 - protein coding gene mediator complex subunit 24
Tssr110580 11 98706554 to 98706570 16 - TSS region transcription start site region 110580
Tssr110581 11 98707570 to 98707582 12 - TSS region transcription start site region 110581
Tssr110582 11 98707645 to 98707656 11 - TSS region transcription start site region 110582
Tssr110583 11 98707736 to 98707743 7 - TSS region transcription start site region 110583
Tssr110584 11 98707757 to 98707777 20 - TSS region transcription start site region 110584
Gm22059 11 98710986 to 98711089 103 - snoRNA gene predicted gene, 22059
Gm31252 11 98719271 to 98726857 7586 + pseudogene predicted gene, 31252
Tssr110585 11 98729401 to 98729432 31 - TSS region transcription start site region 110585
nmf148 11 109328475 to 98683655 -10644820 heritable phenotypic marker neuroscience mutagenesis facility, 148