Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:98546577-98627543

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr110575 11 98546655 to 98546666 11 - TSS region transcription start site region 110575
Cpgi3762 11 98550743 to 98551539 796 CpG island CpG island 3762
Tssr110576 11 98550968 to 98550977 9 - TSS region transcription start site region 110576
Zpbp2 11 98551097 to 98558665 7568 + protein coding gene zona pellucida binding protein 2
Tssr104752 11 98551105 to 98551165 60 + TSS region transcription start site region 104752
Tssr104753 11 98551173 to 98551178 5 + TSS region transcription start site region 104753
Gm38981 11 98563696 to 98568766 5070 - lncRNA gene predicted gene, 38981
Gm31460 11 98575633 to 98581152 5519 + lncRNA gene predicted gene, 31460
Tssr104754 11 98575917 to 98575929 12 + TSS region transcription start site region 104754
Ormdl3 11 98581294 to 98587245 5951 - protein coding gene ORM1-like 3 (S. cerevisiae)
Tssr110577 11 98584246 to 98584281 35 - TSS region transcription start site region 110577
Cpgi3763 11 98586577 to 98587543 966 CpG island CpG island 3763
Tssr110578 11 98587193 to 98587253 60 - TSS region transcription start site region 110578
Lrrc3c 11 98598291 to 98599586 1295 + protein coding gene leucine rich repeat containing 3C
Cpgi3764 11 98598829 to 98599631 802 CpG island CpG island 3764
Gm12355 11 98624368 to 98625662 1294 - protein coding gene predicted gene 12355
Tssr104755 11 98626344 to 98626349 5 + TSS region transcription start site region 104755
Gsdma3 11 98626360 to 98638226 11866 + protein coding gene gasdermin A3