MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:98350309-98360320

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ppp1r1b	11	98348406 to 98357796	9390	+	protein coding gene	protein phosphatase 1, regulatory inhibitor subunit 1B
Tssr104721	11	98350443 to 98350453	10	+	TSS region	transcription start site region 104721
1700003D09Rik	11	98350718 to 98358283	7565	-	lncRNA gene	RIKEN cDNA 1700003D09 gene
Tssr104722	11	98355309 to 98355320	11	+	TSS region	transcription start site region 104722
Tssr104723	11	98355322 to 98355330	8	+	TSS region	transcription start site region 104723
Tssr104724	11	98355335 to 98355346	11	+	TSS region	transcription start site region 104724
Tssr104725	11	98355349 to 98355362	13	+	TSS region	transcription start site region 104725
Tssr104726	11	98356712 to 98356726	14	+	TSS region	transcription start site region 104726
Tssr104727	11	98356727 to 98356738	11	+	TSS region	transcription start site region 104727
Tssr104728	11	98357038 to 98357079	41	+	TSS region	transcription start site region 104728
Cpgi3754	11	98358234 to 98358834	600		CpG island	CpG island 3754
Tssr110530	11	98358236 to 98358253	17	-	TSS region	transcription start site region 110530
Stard3	11	98358368 to 98381112	22744	+	protein coding gene	START domain containing 3
Tssr104729	11	98358384 to 98358400	16	+	TSS region	transcription start site region 104729
Tssr104730	11	98358402 to 98358457	55	+	TSS region	transcription start site region 104730
Tssr104731	11	98358685 to 98358725	40	+	TSS region	transcription start site region 104731
Tssr110531	11	98359465 to 98359476	11	-	TSS region	transcription start site region 110531