Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:98348677-98440490

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3753 11 98348105 to 98349469 1364 CpG island CpG island 3753
Ppp1r1b 11 98348406 to 98357796 9390 + protein coding gene protein phosphatase 1, regulatory inhibitor subunit 1B
Tssr104717 11 98348662 to 98348742 80 + TSS region transcription start site region 104717
Tssr104718 11 98348752 to 98348763 11 + TSS region transcription start site region 104718
Tssr104719 11 98348764 to 98348779 15 + TSS region transcription start site region 104719
Tssr104720 11 98349053 to 98349069 16 + TSS region transcription start site region 104720
Tssr104721 11 98350443 to 98350453 10 + TSS region transcription start site region 104721
1700003D09Rik 11 98350718 to 98358283 7565 - lncRNA gene RIKEN cDNA 1700003D09 gene
Tssr104722 11 98355309 to 98355320 11 + TSS region transcription start site region 104722
Tssr104723 11 98355322 to 98355330 8 + TSS region transcription start site region 104723
Tssr104724 11 98355335 to 98355346 11 + TSS region transcription start site region 104724
Tssr104725 11 98355349 to 98355362 13 + TSS region transcription start site region 104725
Tssr104726 11 98356712 to 98356726 14 + TSS region transcription start site region 104726
Tssr104727 11 98356727 to 98356738 11 + TSS region transcription start site region 104727
Tssr104728 11 98357038 to 98357079 41 + TSS region transcription start site region 104728
Cpgi3754 11 98358234 to 98358834 600 CpG island CpG island 3754
Tssr110530 11 98358236 to 98358253 17 - TSS region transcription start site region 110530
Stard3 11 98358368 to 98381112 22744 + protein coding gene START domain containing 3
Tssr104729 11 98358384 to 98358400 16 + TSS region transcription start site region 104729
Tssr104730 11 98358402 to 98358457 55 + TSS region transcription start site region 104730
Tssr104731 11 98358685 to 98358725 40 + TSS region transcription start site region 104731
Tssr110531 11 98359465 to 98359476 11 - TSS region transcription start site region 110531
Tssr104732 11 98371792 to 98371811 19 + TSS region transcription start site region 104732
Tssr104733 11 98371974 to 98371985 11 + TSS region transcription start site region 104733
Tssr104734 11 98377979 to 98377990 11 + TSS region transcription start site region 104734
Tcap 11 98383811 to 98384953 1142 + protein coding gene titin-cap
Tssr104735 11 98383816 to 98383832 16 + TSS region transcription start site region 104735
Tssr110532 11 98384797 to 98384812 15 - TSS region transcription start site region 110532
Cpgi3755 11 98386423 to 98387006 583 CpG island CpG island 3755
Tssr104736 11 98386616 to 98386633 17 + TSS region transcription start site region 104736
Pnmt 11 98386632 to 98388097 1465 + protein coding gene phenylethanolamine-N-methyltransferase
Pgap3 11 98388677 to 98400490 11813 - protein coding gene post-GPI attachment to proteins 3
Tssr110533 11 98399594 to 98399625 31 - TSS region transcription start site region 110533
Cpgi3756 11 98400113 to 98400643 530 CpG island CpG island 3756
Tssr110534 11 98400393 to 98400446 53 - TSS region transcription start site region 110534
Tssr110535 11 98400453 to 98400474 21 - TSS region transcription start site region 110535
Tssr104737 11 98400537 to 98400562 25 + TSS region transcription start site region 104737
Cpgi3757 11 98412237 to 98413380 1143 CpG island CpG island 3757
Tssr104738 11 98412376 to 98412388 12 + TSS region transcription start site region 104738
Tssr104739 11 98412461 to 98412566 105 + TSS region transcription start site region 104739
Erbb2 11 98412484 to 98437716 25232 + protein coding gene erb-b2 receptor tyrosine kinase 2
Gm25048 11 98423290 to 98423380 90 - snRNA gene predicted gene, 25048
Mien1 11 98437708 to 98438988 1280 - protein coding gene migration and invasion enhancer 1
Gm12352 11 98438037 to 98439046 1009 + antisense lncRNA gene predicted gene 12352
Cpgi3758 11 98438478 to 98439195 717 CpG island CpG island 3758
Tssr110536 11 98438708 to 98438776 68 - TSS region transcription start site region 110536
Tssr110537 11 98438941 to 98439008 67 - TSS region transcription start site region 110537