MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:98263443-98326615

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdk12	11	98203059 to 98278504	75445	+	protein coding gene	cyclin-dependent kinase 12
n-R5s73	11	98273260 to 98273366	106	-	rRNA gene	nuclear encoded rRNA 5S 73
D11Ingm46	11	98274865 to 98274980	115		DNA segment	DNA segment, Chr 11, Ingenium Pharmaceuticals 46
Gm20644	11	98285382 to 98287444	2062	+	sense overlapping lncRNA gene	predicted gene 20644
Gm31194	11	98293443 to 98296615	3172	+	lncRNA gene	predicted gene, 31194
Tssr104712	11	98294256 to 98294261	5	+	TSS region	transcription start site region 104712
Cpgi3744	11	98294273 to 98295271	998		CpG island	CpG island 3744
Gm31317	11	98298777 to 98314135	15358	-	lncRNA gene	predicted gene, 31317
Cpgi3745	11	98313916 to 98314132	216		CpG island	CpG island 3745
Cpgi3746	11	98319208 to 98319377	169		CpG island	CpG island 3746
Tssr110519	11	98321281 to 98321284	3	-	TSS region	transcription start site region 110519
Cpgi3747	11	98325399 to 98325570	171		CpG island	CpG island 3747
Neurod2	11	98325417 to 98329645	4228	-	protein coding gene	neurogenic differentiation 2
Cpgi3748	11	98325829 to 98326162	333		CpG island	CpG island 3748
Tssr110520	11	98326060 to 98326082	22	-	TSS region	transcription start site region 110520
Tssr110521	11	98326186 to 98326198	12	-	TSS region	transcription start site region 110521
Tssr110522	11	98326202 to 98326211	9	-	TSS region	transcription start site region 110522
Tssr104713	11	98326302 to 98326312	10	+	TSS region	transcription start site region 104713
Tssr110523	11	98326451 to 98326460	9	-	TSS region	transcription start site region 110523