MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:97891671-97991740

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm11630	11	97884594 to 97893811	9217	+	lincRNA gene	predicted gene 11630
Tssr104690	11	97921444 to 97921446	2	+	TSS region	transcription start site region 104690
Cpgi3728	11	97923032 to 97923311	279		CpG island	CpG island 3728
Plxdc1	11	97923238 to 97986444	63206	-	protein coding gene	plexin domain containing 1
Gm22461	11	97941671 to 97941740	69	-	miRNA gene	predicted gene, 22461
Tssr110489	11	97949637 to 97949658	21	-	TSS region	transcription start site region 110489
Tssr110490	11	97954956 to 97954972	16	-	TSS region	transcription start site region 110490
Tssr110491	11	97955268 to 97955310	42	-	TSS region	transcription start site region 110491
Cpgi3729	11	97966868 to 97967086	218		CpG island	CpG island 3729
Gm11633	11	97968792 to 97969235	443	+	pseudogene	predicted gene 11633
Cpgi3730	11	97985729 to 97987047	1318		CpG island	CpG island 3730
Tssr110492	11	97986384 to 97986472	88	-	TSS region	transcription start site region 110492
Cpgi3731	11	97987680 to 97987990	310		CpG island	CpG island 3731
n-TCgca55	11	97988246 to 97988317	71	-	tRNA gene	nuclear encoded tRNA cysteine 55 (anticodon GCA)
Cpgi3732	11	97988420 to 97988911	491		CpG island	CpG island 3732
Tssr110493	11	97988690 to 97988702	12	-	TSS region	transcription start site region 110493
Tssr110494	11	97988708 to 97988723	15	-	TSS region	transcription start site region 110494
n-TCgca54	11	97988923 to 97988994	71	-	tRNA gene	nuclear encoded tRNA cysteine 54 (anticodon GCA)
Arl5c	11	97989578 to 97996181	6603	-	protein coding gene	ADP-ribosylation factor-like 5C