Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97804538-97964549

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lasp1 11 97799005 to 97838765 39760 + protein coding gene LIM and SH3 protein 1
Tssr104671 11 97806302 to 97806341 39 + TSS region transcription start site region 104671
Tssr104672 11 97806598 to 97806620 22 + TSS region transcription start site region 104672
Tssr104673 11 97806721 to 97806771 50 + TSS region transcription start site region 104673
Tssr104674 11 97806811 to 97806815 4 + TSS region transcription start site region 104674
Tssr104675 11 97815591 to 97815598 7 + TSS region transcription start site region 104675
Tssr104676 11 97815639 to 97815650 11 + TSS region transcription start site region 104676
Tssr104677 11 97815653 to 97815667 14 + TSS region transcription start site region 104677
Tssr104678 11 97815725 to 97815736 11 + TSS region transcription start site region 104678
Tssr104679 11 97825559 to 97825581 22 + TSS region transcription start site region 104679
Tssr110486 11 97829915 to 97829944 29 - TSS region transcription start site region 110486
Tssr104680 11 97830132 to 97830143 11 + TSS region transcription start site region 104680
Tssr104681 11 97833287 to 97833291 4 + TSS region transcription start site region 104681
Tssr104682 11 97836353 to 97836368 15 + TSS region transcription start site region 104682
Tssr104683 11 97838106 to 97838119 13 + TSS region transcription start site region 104683
Tssr104684 11 97838131 to 97838146 15 + TSS region transcription start site region 104684
Tssr104685 11 97838412 to 97838425 13 + TSS region transcription start site region 104685
B230217C12Rik 11 97840780 to 97843043 2263 + protein coding gene RIKEN cDNA B230217C12 gene
Cpgi3726 11 97841217 to 97841426 209 CpG island CpG island 3726
Tssr104686 11 97841282 to 97841359 77 + TSS region transcription start site region 104686
Tssr104687 11 97844517 to 97844531 14 + TSS region transcription start site region 104687
Fbxo47 11 97853826 to 97884154 30328 - protein coding gene F-box protein 47
Tssr110487 11 97855535 to 97855562 27 - TSS region transcription start site region 110487
Cpgi3727 11 97883522 to 97884351 829 CpG island CpG island 3727
Tssr110488 11 97884122 to 97884139 17 - TSS region transcription start site region 110488
Tssr104688 11 97884538 to 97884549 11 + TSS region transcription start site region 104688
Tssr104689 11 97884580 to 97884594 14 + TSS region transcription start site region 104689
Gm11630 11 97884594 to 97893811 9217 + lincRNA gene predicted gene 11630
Tssr104690 11 97921444 to 97921446 2 + TSS region transcription start site region 104690
Cpgi3728 11 97923032 to 97923311 279 CpG island CpG island 3728
Plxdc1 11 97923238 to 97986444 63206 - protein coding gene plexin domain containing 1
Gm22461 11 97941671 to 97941740 69 - miRNA gene predicted gene, 22461
Tssr110489 11 97949637 to 97949658 21 - TSS region transcription start site region 110489
Tssr110490 11 97954956 to 97954972 16 - TSS region transcription start site region 110490
Tssr110491 11 97955268 to 97955310 42 - TSS region transcription start site region 110491