Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97714897-97775035

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pip4k2b 11 97715157 to 97744704 29547 - protein coding gene phosphatidylinositol-5-phosphate 4-kinase, type II, beta
Tssr110477 11 97716907 to 97716923 16 - TSS region transcription start site region 110477
Tssr110478 11 97718409 to 97718420 11 - TSS region transcription start site region 110478
Tssr110479 11 97718437 to 97718451 14 - TSS region transcription start site region 110479
Gm11614 11 97723651 to 97725711 2060 + antisense lncRNA gene predicted gene 11614
Tssr104656 11 97726805 to 97726825 20 + TSS region transcription start site region 104656
Tssr3662 11 97728359 to 97728408 49 - TSS region transcription start site region 3662
Cpgi3721 11 97743873 to 97745495 1622 CpG island CpG island 3721
Tssr110480 11 97744659 to 97744774 115 - TSS region transcription start site region 110480
Mir8102 11 97744897 to 97745035 138 + miRNA gene microRNA 8102
2810474C18Rik 11 97744906 to 97745506 600 unclassified gene RIKEN cDNA 2810474C18 gene
Cwc25 11 97745481 to 97766556 21075 - protein coding gene CWC25 spliceosome-associated protein
Cpgi3722 11 97766345 to 97766907 562 CpG island CpG island 3722
Tssr110481 11 97766480 to 97766487 7 - TSS region transcription start site region 110481
Tssr110482 11 97766508 to 97766574 66 - TSS region transcription start site region 110482
Tssr104657 11 97766628 to 97766687 59 + TSS region transcription start site region 104657
Tssr104658 11 97766826 to 97766860 34 + TSS region transcription start site region 104658
Atp5l2-ps 11 97768060 to 97768371 311 + pseudogene ATP synthase, H+ transporting, mitochondrial FO complex, subunit G2, pseudogene
n-TCgca18 11 97769829 to 97769900 71 - tRNA gene nuclear encoded tRNA cysteine 18 (anticodon GCA)
1700001P01Rik 11 97771481 to 97775918 4437 - protein coding gene RIKEN cDNA 1700001P01 gene