Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97713873-97775495

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D11Mit145.2 11 97714590 to 97714701 111 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 145.2
D11Mit145 11 97714679 to 97714829 150 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 145
Pip4k2b 11 97715157 to 97744704 29547 - protein coding gene phosphatidylinositol-5-phosphate 4-kinase, type II, beta
Tssr110477 11 97716907 to 97716923 16 - TSS region transcription start site region 110477
Tssr110478 11 97718409 to 97718420 11 - TSS region transcription start site region 110478
Tssr110479 11 97718437 to 97718451 14 - TSS region transcription start site region 110479
Gm11614 11 97723651 to 97725711 2060 + antisense lncRNA gene predicted gene 11614
Tssr104656 11 97726805 to 97726825 20 + TSS region transcription start site region 104656
Tssr3662 11 97728359 to 97728408 49 - TSS region transcription start site region 3662
Cpgi3721 11 97743873 to 97745495 1622 CpG island CpG island 3721
Tssr110480 11 97744659 to 97744774 115 - TSS region transcription start site region 110480
Mir8102 11 97744897 to 97745035 138 + miRNA gene microRNA 8102
2810474C18Rik 11 97744906 to 97745506 600 unclassified gene RIKEN cDNA 2810474C18 gene
Cwc25 11 97745481 to 97766556 21075 - protein coding gene CWC25 spliceosome-associated protein
Cpgi3722 11 97766345 to 97766907 562 CpG island CpG island 3722
Tssr110481 11 97766480 to 97766487 7 - TSS region transcription start site region 110481
Tssr110482 11 97766508 to 97766574 66 - TSS region transcription start site region 110482
Tssr104657 11 97766628 to 97766687 59 + TSS region transcription start site region 104657
Tssr104658 11 97766826 to 97766860 34 + TSS region transcription start site region 104658
Atp5l2-ps 11 97768060 to 97768371 311 + pseudogene ATP synthase, H+ transporting, mitochondrial FO complex, subunit G2, pseudogene
n-TCgca18 11 97769829 to 97769900 71 - tRNA gene nuclear encoded tRNA cysteine 18 (anticodon GCA)
1700001P01Rik 11 97771481 to 97775918 4437 - protein coding gene RIKEN cDNA 1700001P01 gene
Tssr104659 11 97775383 to 97775394 11 + TSS region transcription start site region 104659
Cpgi3723 11 97775475 to 97775850 375 CpG island CpG island 3723