Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97678394-97728455

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mllt6 11 97663412 to 97685461 22049 + protein coding gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6
Tssr104652 11 97683106 to 97683111 5 + TSS region transcription start site region 104652
Cpgi3718 11 97685569 to 97685970 401 CpG island CpG island 3718
Tssr104653 11 97685794 to 97685845 51 + TSS region transcription start site region 104653
Cisd3 11 97685826 to 97688621 2795 + protein coding gene CDGSH iron sulfur domain 3
Tssr104654 11 97685903 to 97685966 63 + TSS region transcription start site region 104654
Tssr110470 11 97687206 to 97687230 24 - TSS region transcription start site region 110470
Pcgf2 11 97688823 to 97700497 11674 - protein coding gene polycomb group ring finger 2
Tssr110471 11 97690108 to 97690165 57 - TSS region transcription start site region 110471
Tssr110472 11 97690343 to 97690358 15 - TSS region transcription start site region 110472
Cpgi3719 11 97698596 to 97701156 2560 CpG island CpG island 3719
Tssr110473 11 97699555 to 97699572 17 - TSS region transcription start site region 110473
Tssr110474 11 97699634 to 97699698 64 - TSS region transcription start site region 110474
Tssr110475 11 97699700 to 97699709 9 - TSS region transcription start site region 110475
Tssr110476 11 97700327 to 97700349 22 - TSS region transcription start site region 110476
Cpgi3720 11 97702356 to 97703697 1341 CpG island CpG island 3720
n-TNgtt8 11 97702449 to 97702522 73 - tRNA gene nuclear encoded tRNA asparagine 8 (anticodon GTT)
Tssr104655 11 97703394 to 97703455 61 + TSS region transcription start site region 104655
Psmb3 11 97703434 to 97713500 10066 + protein coding gene proteasome (prosome, macropain) subunit, beta type 3
D11Mit145.2 11 97714590 to 97714701 111 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 145.2
D11Mit145 11 97714679 to 97714829 150 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 145
Pip4k2b 11 97715157 to 97744704 29547 - protein coding gene phosphatidylinositol-5-phosphate 4-kinase, type II, beta
Tssr110477 11 97716907 to 97716923 16 - TSS region transcription start site region 110477
Tssr110478 11 97718409 to 97718420 11 - TSS region transcription start site region 110478
Tssr110479 11 97718437 to 97718451 14 - TSS region transcription start site region 110479
Gm11614 11 97723651 to 97725711 2060 + antisense lncRNA gene predicted gene 11614
Tssr104656 11 97726805 to 97726825 20 + TSS region transcription start site region 104656
Tssr3662 11 97728359 to 97728408 49 - TSS region transcription start site region 3662