Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97373187-97553616

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Socs7 11 97362551 to 97398542 35991 + protein coding gene suppressor of cytokine signaling 7
Tssr104621 11 97376478 to 97376483 5 + TSS region transcription start site region 104621
Cpgi3696 11 97400261 to 97400727 466 CpG island CpG island 3696
Cpgi3697 11 97403910 to 97405151 1241 CpG island CpG island 3697
Tssr104622 11 97404388 to 97404440 52 + TSS region transcription start site region 104622
Cpgi3698 11 97415499 to 97416282 783 CpG island CpG island 3698
Tssr104623 11 97415527 to 97415538 11 + TSS region transcription start site region 104623
Arhgap23 11 97415533 to 97502402 86869 + protein coding gene Rho GTPase activating protein 23
Tssr104624 11 97415554 to 97415576 22 + TSS region transcription start site region 104624
Tssr104625 11 97415577 to 97415597 20 + TSS region transcription start site region 104625
Cpgi3699 11 97428098 to 97428587 489 CpG island CpG island 3699
Cpgi3700 11 97434923 to 97435091 168 CpG island CpG island 3700
Tssr110424 11 97435172 to 97435181 9 - TSS region transcription start site region 110424
Tssr104626 11 97435311 to 97435334 23 + TSS region transcription start site region 104626
Tssr104627 11 97435336 to 97435347 11 + TSS region transcription start site region 104627
Tssr104628 11 97435369 to 97435379 10 + TSS region transcription start site region 104628
Tssr3661 11 97435389 to 97435395 6 + TSS region transcription start site region 3661
Tssr110425 11 97435918 to 97435951 33 - TSS region transcription start site region 110425
Tssr104629 11 97436275 to 97436320 45 + TSS region transcription start site region 104629
Tssr104630 11 97438185 to 97438188 3 + TSS region transcription start site region 104630
Cpgi3701 11 97439699 to 97440922 1223 CpG island CpG island 3701
Tssr110426 11 97440054 to 97440089 35 - TSS region transcription start site region 110426
Tssr104631 11 97440153 to 97440176 23 + TSS region transcription start site region 104631
Tssr104632 11 97440179 to 97440205 26 + TSS region transcription start site region 104632
Tssr104633 11 97440219 to 97440238 19 + TSS region transcription start site region 104633
Cpgi3702 11 97450005 to 97450195 190 CpG island CpG island 3702
Tssr104634 11 97450136 to 97450180 44 + TSS region transcription start site region 104634
Cpgi3703 11 97451802 to 97452047 245 CpG island CpG island 3703
Cpgi3704 11 97463187 to 97463616 429 CpG island CpG island 3704
4933428G20Rik 11 97490783 to 97500340 9557 - protein coding gene RIKEN cDNA 4933428G20 gene
Cpgi3705 11 97499914 to 97501455 1541 CpG island CpG island 3705
Tssr110427 11 97500350 to 97500368 18 - TSS region transcription start site region 110427
Srcin1 11 97509340 to 97575126 65786 - protein coding gene SRC kinase signaling inhibitor 1
Tssr110428 11 97511025 to 97511040 15 - TSS region transcription start site region 110428
Gm11611 11 97519612 to 97521895 2283 - sense intronic lncRNA gene predicted gene 11611
Tssr110429 11 97523210 to 97523218 8 - TSS region transcription start site region 110429
Tssr110430 11 97523225 to 97523241 16 - TSS region transcription start site region 110430
Tssr110431 11 97523905 to 97523915 10 - TSS region transcription start site region 110431
Tssr110432 11 97523920 to 97523934 14 - TSS region transcription start site region 110432
Tssr110433 11 97523941 to 97523946 5 - TSS region transcription start site region 110433
Tssr110434 11 97525464 to 97525474 10 - TSS region transcription start site region 110434
Cpgi3706 11 97531672 to 97532264 592 CpG island CpG island 3706
Cpgi3707 11 97532986 to 97533205 219 CpG island CpG island 3707
Tssr110435 11 97533160 to 97533163 3 - TSS region transcription start site region 110435
Cpgi3708 11 97534365 to 97535408 1043 CpG island CpG island 3708
Cpgi3709 11 97536213 to 97537709 1496 CpG island CpG island 3709
Tssr110436 11 97536934 to 97536944 10 - TSS region transcription start site region 110436
Tssr110437 11 97537157 to 97537165 8 - TSS region transcription start site region 110437
Tssr110438 11 97537218 to 97537228 10 - TSS region transcription start site region 110438
Tssr110439 11 97539779 to 97539792 13 - TSS region transcription start site region 110439
Tssr104635 11 97539896 to 97539899 3 + TSS region transcription start site region 104635
Tssr110440 11 97540357 to 97540382 25 - TSS region transcription start site region 110440
Cpgi3710 11 97546008 to 97547523 1515 CpG island CpG island 3710
Tssr110441 11 97547202 to 97547224 22 - TSS region transcription start site region 110441
Cpgi3711 11 97551611 to 97551956 345 CpG island CpG island 3711