Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97039858-97262063

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc46 11 97034602 to 97041369 6767 - protein coding gene leucine rich repeat containing 46
Tssr104595 11 97041073 to 97041110 37 + TSS region transcription start site region 104595
Tssr110383 11 97041307 to 97041353 46 - TSS region transcription start site region 110383
Cpgi3683 11 97041355 to 97041882 527 CpG island CpG island 3683
Tssr110384 11 97041364 to 97041392 28 - TSS region transcription start site region 110384
Tssr110385 11 97041395 to 97041402 7 - TSS region transcription start site region 110385
Tssr110386 11 97041424 to 97041436 12 - TSS region transcription start site region 110386
Tssr104596 11 97041554 to 97041563 9 + TSS region transcription start site region 104596
Mrpl10 11 97041567 to 97049213 7646 + protein coding gene mitochondrial ribosomal protein L10
Tssr104597 11 97041569 to 97041602 33 + TSS region transcription start site region 104597
Tssr104598 11 97044524 to 97044528 4 + TSS region transcription start site region 104598
Tssr110387 11 97048367 to 97048385 18 - TSS region transcription start site region 110387
Tssr110388 11 97048395 to 97048415 20 - TSS region transcription start site region 110388
Gm11574 11 97048691 to 97051432 2741 - unclassified non-coding RNA gene predicted gene 11574
Tssr104599 11 97050594 to 97050630 36 + TSS region transcription start site region 104599
Osbpl7 11 97050628 to 97068904 18276 + protein coding gene oxysterol binding protein-like 7
Cpgi3684 11 97050651 to 97050951 300 CpG island CpG island 3684
Tssr104600 11 97050811 to 97050856 45 + TSS region transcription start site region 104600
Tssr104601 11 97050857 to 97050877 20 + TSS region transcription start site region 104601
Mir8103 11 97063768 to 97063874 106 + miRNA gene microRNA 8103
Tssr104602 11 97066838 to 97066858 20 + TSS region transcription start site region 104602
D11Mit222 11 97072666 to 97072770 104 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 222
Gm11573 11 97096933 to 97097326 393 + pseudogene predicted gene 11573
Tbx21 11 97098071 to 97115331 17260 - protein coding gene T-box 21
Cpgi3685 11 97114338 to 97116129 1791 CpG island CpG island 3685
Tssr110389 11 97114533 to 97114536 3 - TSS region transcription start site region 110389
Tssr110390 11 97115327 to 97115332 5 - TSS region transcription start site region 110390
Gm11572 11 97116796 to 97116915 119 - pseudogene predicted gene 11572
Tssr110391 11 97126950 to 97126995 45 - TSS region transcription start site region 110391
Cpgi3686 11 97127044 to 97127483 439 CpG island CpG island 3686
Tbkbp1 11 97136171 to 97151490 15319 - protein coding gene TBK1 binding protein 1
Cpgi3687 11 97138468 to 97139678 1210 CpG island CpG island 3687
Tssr110392 11 97142282 to 97142286 4 - TSS region transcription start site region 110392
Tssr110393 11 97142926 to 97142930 4 - TSS region transcription start site region 110393
Mir7235 11 97146364 to 97146419 55 - miRNA gene microRNA 7235
Cpgi3688 11 97149858 to 97152063 2205 CpG island CpG island 3688
Tssr110394 11 97150025 to 97150084 59 - TSS region transcription start site region 110394
Kpnb1 11 97159714 to 97187881 28167 - protein coding gene karyopherin (importin) beta 1
Gm11583 11 97160990 to 97161675 685 + antisense lncRNA gene predicted gene 11583
Tssr104603 11 97161526 to 97161539 13 + TSS region transcription start site region 104603
Tssr110395 11 97162006 to 97162010 4 - TSS region transcription start site region 110395
Tssr110396 11 97182657 to 97182661 4 - TSS region transcription start site region 110396
Cpgi3689 11 97186867 to 97188910 2043 CpG island CpG island 3689
Tssr110397 11 97187592 to 97187616 24 - TSS region transcription start site region 110397
Tssr110398 11 97187648 to 97187680 32 - TSS region transcription start site region 110398
Tssr104604 11 97187700 to 97187711 11 + TSS region transcription start site region 104604
Tssr110399 11 97187815 to 97187835 20 - TSS region transcription start site region 110399
Tssr110400 11 97187836 to 97187850 14 - TSS region transcription start site region 110400
Tssr110401 11 97187872 to 97187926 54 - TSS region transcription start site region 110401
Tssr110402 11 97187930 to 97187948 18 - TSS region transcription start site region 110402
Tssr110403 11 97188070 to 97188072 2 - TSS region transcription start site region 110403
Tssr104605 11 97188468 to 97188481 13 + TSS region transcription start site region 104605
Tssr104606 11 97188554 to 97188580 26 + TSS region transcription start site region 104606
Npepps 11 97205842 to 97280638 74796 - protein coding gene aminopeptidase puromycin sensitive
Tssr110404 11 97207001 to 97207017 16 - TSS region transcription start site region 110404
Tssr110405 11 97237877 to 97237881 4 - TSS region transcription start site region 110405
Tssr110406 11 97239712 to 97239717 5 - TSS region transcription start site region 110406