Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96977223-97017700

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nidd6k 11 19174204 to 97007000 77832796 QTL Nidd6 on KK-A
Alo1 11 81775249 to 97007000 15231751 heritable phenotypic marker alopecia 1
Sp2 11 96953332 to 96982129 28797 - protein coding gene Sp2 transcription factor
Cpgi3677 11 96977064 to 96978372 1308 CpG island CpG island 3677
Tssr110377 11 96977290 to 96977328 38 - TSS region transcription start site region 110377
Tssr110378 11 96977345 to 96977384 39 - TSS region transcription start site region 110378
Tssr110379 11 96977660 to 96977693 33 - TSS region transcription start site region 110379
Gm30809 11 96977701 to 96984111 6410 + lncRNA gene predicted gene, 30809
Cpgi3678 11 96988016 to 96988261 245 CpG island CpG island 3678
Tssr104590 11 96988072 to 96988082 10 + TSS region transcription start site region 104590
Tssr110380 11 96988486 to 96988488 2 - TSS region transcription start site region 110380
Cpgi3679 11 96997223 to 96997700 477 CpG island CpG island 3679
Estq3 11 97006867 to 99436202 2429335 QTL estradiol regulated response QTL 3
D11Mit67 11 97006867 to 97007000 133 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 67
Sp6 11 97013569 to 97024739 11170 + protein coding gene trans-acting transcription factor 6
Sstapa3 11 110713165 to 97006867 -13706298 QTL suseptibility to Staphylococcus aureus infection 3