Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96938705-96998718

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pnpo 11 96937825 to 96943986 6161 - protein coding gene pyridoxine 5'-phosphate oxidase
Cpgi3676 11 96943536 to 96944397 861 CpG island CpG island 3676
Tssr110363 11 96943773 to 96943784 11 - TSS region transcription start site region 110363
Tssr110364 11 96943786 to 96943797 11 - TSS region transcription start site region 110364
Tssr110365 11 96943800 to 96943850 50 - TSS region transcription start site region 110365
Tssr110366 11 96943931 to 96943940 9 - TSS region transcription start site region 110366
Tssr110367 11 96943945 to 96944023 78 - TSS region transcription start site region 110367
Tssr104586 11 96944142 to 96944222 80 + TSS region transcription start site region 104586
D030028A08Rik 11 96944146 to 96965060 20914 + lncRNA gene RIKEN cDNA D030028A08 gene
Tssr104587 11 96944234 to 96944285 51 + TSS region transcription start site region 104587
Tssr104588 11 96944286 to 96944299 13 + TSS region transcription start site region 104588
Tssr110368 11 96944933 to 96944946 13 - TSS region transcription start site region 110368
Sp2 11 96953332 to 96982129 28797 - protein coding gene Sp2 transcription factor
Tssr110369 11 96953688 to 96953711 23 - TSS region transcription start site region 110369
Tssr110370 11 96953732 to 96953744 12 - TSS region transcription start site region 110370
Tssr110371 11 96955919 to 96955957 38 - TSS region transcription start site region 110371
Tssr110372 11 96955964 to 96955975 11 - TSS region transcription start site region 110372
Tssr110373 11 96956193 to 96956221 28 - TSS region transcription start site region 110373
Tssr110374 11 96956223 to 96956236 13 - TSS region transcription start site region 110374
D11Jpk3 11 96958225 to 96958528 303 DNA segment DNA segment, Chr 11, Japan, Kominami 3
Tssr104589 11 96967019 to 96967033 14 + TSS region transcription start site region 104589
Tssr110375 11 96968655 to 96968673 18 - TSS region transcription start site region 110375
Tssr110376 11 96968705 to 96968718 13 - TSS region transcription start site region 110376
Cpgi3677 11 96977064 to 96978372 1308 CpG island CpG island 3677
Tssr110377 11 96977290 to 96977328 38 - TSS region transcription start site region 110377
Tssr110378 11 96977345 to 96977384 39 - TSS region transcription start site region 110378
Tssr110379 11 96977660 to 96977693 33 - TSS region transcription start site region 110379
Gm30809 11 96977701 to 96984111 6410 + lncRNA gene predicted gene, 30809
Cpgi3678 11 96988016 to 96988261 245 CpG island CpG island 3678
Tssr104590 11 96988072 to 96988082 10 + TSS region transcription start site region 104590
Tssr110380 11 96988486 to 96988488 2 - TSS region transcription start site region 110380
Cpgi3679 11 96997223 to 96997700 477 CpG island CpG island 3679