Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96842501-96952535

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3671 11 96849567 to 96850578 1011 CpG island CpG island 3671
Tssr104577 11 96849863 to 96849897 34 + TSS region transcription start site region 104577
Copz2 11 96849876 to 96861203 11327 + protein coding gene coatomer protein complex, subunit zeta 2
Mir152 11 96850393 to 96850465 72 + miRNA gene microRNA 152
Tssr104578 11 96855254 to 96855272 18 + TSS region transcription start site region 104578
Cpgi3672 11 96861467 to 96862332 865 CpG island CpG island 3672
Gm11523 11 96862997 to 96873954 10957 - lncRNA gene predicted gene 11523
Cpgi3673 11 96863304 to 96863551 247 CpG island CpG island 3673
D11Mit98 11 96863667 to 96863793 126 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 98
D11Dcr19 11 96863673 to 96863792 119 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 19
Gm11524 11 96870195 to 96871001 806 + pseudogene predicted gene 11524
Cpgi3674 11 96875568 to 96876337 769 CpG island CpG island 3674
Tssr110358 11 96880439 to 96880450 11 - TSS region transcription start site region 110358
Gm38961 11 96892501 to 96902535 10034 - lncRNA gene predicted gene, 38961
D11Mit160 11 96895099 to 96895292 193 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 160
D11Dcr20 11 96895122 to 96895269 147 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 20
Cdk5rap3 11 96907426 to 96916496 9070 - protein coding gene CDK5 regulatory subunit associated protein 3
Cpgi3675 11 96915955 to 96916830 875 CpG island CpG island 3675
Tssr110359 11 96916378 to 96916406 28 - TSS region transcription start site region 110359
Tssr110360 11 96916407 to 96916426 19 - TSS region transcription start site region 110360
Tssr110361 11 96916448 to 96916531 83 - TSS region transcription start site region 110361
Gm11525 11 96918941 to 96922493 3552 - antisense lncRNA gene predicted gene 11525
Tssr104579 11 96926150 to 96926156 6 + TSS region transcription start site region 104579
Prr15l 11 96926175 to 96935648 9473 + protein coding gene proline rich 15-like
Tssr104580 11 96926180 to 96926188 8 + TSS region transcription start site region 104580
Tssr104581 11 96929260 to 96929324 64 + TSS region transcription start site region 104581
Tssr104582 11 96929325 to 96929349 24 + TSS region transcription start site region 104582
Tssr104583 11 96929367 to 96929383 16 + TSS region transcription start site region 104583
Tssr104584 11 96929409 to 96929421 12 + TSS region transcription start site region 104584
Tssr104585 11 96931508 to 96931516 8 + TSS region transcription start site region 104585
Tssr3660 11 96934964 to 96934969 5 - TSS region transcription start site region 3660
Tssr110362 11 96936367 to 96936395 28 - TSS region transcription start site region 110362
Pnpo 11 96937825 to 96943986 6161 - protein coding gene pyridoxine 5'-phosphate oxidase
Cpgi3676 11 96943536 to 96944397 861 CpG island CpG island 3676
Tssr110363 11 96943773 to 96943784 11 - TSS region transcription start site region 110363
Tssr110364 11 96943786 to 96943797 11 - TSS region transcription start site region 110364
Tssr110365 11 96943800 to 96943850 50 - TSS region transcription start site region 110365
Tssr110366 11 96943931 to 96943940 9 - TSS region transcription start site region 110366
Tssr110367 11 96943945 to 96944023 78 - TSS region transcription start site region 110367
Tssr104586 11 96944142 to 96944222 80 + TSS region transcription start site region 104586
D030028A08Rik 11 96944146 to 96965060 20914 + lncRNA gene RIKEN cDNA D030028A08 gene
Tssr104587 11 96944234 to 96944285 51 + TSS region transcription start site region 104587
Tssr104588 11 96944286 to 96944299 13 + TSS region transcription start site region 104588
Tssr110368 11 96944933 to 96944946 13 - TSS region transcription start site region 110368