Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96782729-96862755

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3668 11 96788840 to 96789811 971 CpG island CpG island 3668
Tssr110346 11 96788988 to 96789008 20 - TSS region transcription start site region 110346
Tssr104569 11 96789118 to 96789146 28 + TSS region transcription start site region 104569
Cbx1 11 96789127 to 96808640 19513 + protein coding gene chromobox 1
Tssr104570 11 96789149 to 96789206 57 + TSS region transcription start site region 104570
Tssr104571 11 96789213 to 96789224 11 + TSS region transcription start site region 104571
Tssr104572 11 96789235 to 96789254 19 + TSS region transcription start site region 104572
Gm11517 11 96795439 to 96795825 386 - pseudogene predicted gene 11517
Tssr110347 11 96798600 to 96798636 36 - TSS region transcription start site region 110347
Tssr110348 11 96800806 to 96800868 62 - TSS region transcription start site region 110348
Tssr104573 11 96807685 to 96807719 34 + TSS region transcription start site region 104573
Tssr104574 11 96807792 to 96807802 10 + TSS region transcription start site region 104574
4633401L03Rik 11 96814005 to 96815608 1603 unclassified gene RIKEN cDNA 4633401L03 gene
Nfe2l1 11 96817414 to 96829968 12554 - protein coding gene nuclear factor, erythroid derived 2,-like 1
Tssr110349 11 96822729 to 96822755 26 - TSS region transcription start site region 110349
Cpgi3669 11 96823740 to 96824364 624 CpG island CpG island 3669
Tssr110350 11 96823987 to 96824024 37 - TSS region transcription start site region 110350
Tssr110351 11 96824130 to 96824159 29 - TSS region transcription start site region 110351
Tssr110352 11 96824173 to 96824198 25 - TSS region transcription start site region 110352
Tssr110353 11 96828176 to 96828191 15 - TSS region transcription start site region 110353
Cpgi3670 11 96829212 to 96830626 1414 CpG island CpG island 3670
Tssr110354 11 96829465 to 96829476 11 - TSS region transcription start site region 110354
Tssr110355 11 96829483 to 96829499 16 - TSS region transcription start site region 110355
Tssr104575 11 96829597 to 96829643 46 + TSS region transcription start site region 104575
Tssr110356 11 96829904 to 96829951 47 - TSS region transcription start site region 110356
Tssr110357 11 96829959 to 96829972 13 - TSS region transcription start site region 110357
Tssr104576 11 96830190 to 96830216 26 + TSS region transcription start site region 104576
Cpgi3671 11 96849567 to 96850578 1011 CpG island CpG island 3671
Tssr104577 11 96849863 to 96849897 34 + TSS region transcription start site region 104577
Copz2 11 96849876 to 96861203 11327 + protein coding gene coatomer protein complex, subunit zeta 2
Mir152 11 96850393 to 96850465 72 + miRNA gene microRNA 152
Tssr104578 11 96855254 to 96855272 18 + TSS region transcription start site region 104578
Cpgi3672 11 96861467 to 96862332 865 CpG island CpG island 3672