Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96618410-96808423

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skap1 11 96464593 to 96759130 294537 + protein coding gene src family associated phosphoprotein 1
Tssr104559 11 96618503 to 96618506 3 + TSS region transcription start site region 104559
Gm38448 11 96626946 to 96678375 51429 + lncRNA gene predicted gene, 38448
Tssr104560 11 96633767 to 96633795 28 + TSS region transcription start site region 104560
Tssr104561 11 96639183 to 96639185 2 + TSS region transcription start site region 104561
Tssr104562 11 96658634 to 96658679 45 + TSS region transcription start site region 104562
Tssr104563 11 96658762 to 96658773 11 + TSS region transcription start site region 104563
Tssr104564 11 96693603 to 96693614 11 + TSS region transcription start site region 104564
2010300F17Rik 11 96712982 to 96747436 34454 - lincRNA gene RIKEN cDNA 2010300F17 gene
Tssr110334 11 96713349 to 96713405 56 - TSS region transcription start site region 110334
Tssr110335 11 96713410 to 96713423 13 - TSS region transcription start site region 110335
Cpgi3666 11 96724229 to 96724405 176 CpG island CpG island 3666
Tssr104565 11 96739926 to 96739927 1 + TSS region transcription start site region 104565
Tssr104566 11 96742955 to 96742959 4 + TSS region transcription start site region 104566
Tssr104567 11 96747074 to 96747106 32 + TSS region transcription start site region 104567
Tssr110336 11 96747405 to 96747416 11 - TSS region transcription start site region 110336
Tssr110337 11 96747419 to 96747432 13 - TSS region transcription start site region 110337
Tssr110338 11 96747654 to 96747660 6 - TSS region transcription start site region 110338
Gm11537 11 96766802 to 96768269 1467 + antisense lncRNA gene predicted gene 11537
Snx11 11 96767555 to 96777559 10004 - protein coding gene sorting nexin 11
Tssr110339 11 96773345 to 96773352 7 - TSS region transcription start site region 110339
Tssr110340 11 96773359 to 96773366 7 - TSS region transcription start site region 110340
Tssr110341 11 96773377 to 96773388 11 - TSS region transcription start site region 110341
Tssr3659 11 96773402 to 96773413 11 - TSS region transcription start site region 3659
Cpgi3667 11 96777220 to 96777910 690 CpG island CpG island 3667
Tssr110342 11 96777478 to 96777479 1 - TSS region transcription start site region 110342
Tssr110343 11 96777497 to 96777546 49 - TSS region transcription start site region 110343
Tssr104568 11 96777841 to 96777864 23 + TSS region transcription start site region 104568
Tssr110344 11 96780318 to 96780325 7 - TSS region transcription start site region 110344
Tssr110345 11 96780341 to 96780355 14 - TSS region transcription start site region 110345
Cpgi3668 11 96788840 to 96789811 971 CpG island CpG island 3668
Tssr110346 11 96788988 to 96789008 20 - TSS region transcription start site region 110346
Tssr104569 11 96789118 to 96789146 28 + TSS region transcription start site region 104569
Cbx1 11 96789127 to 96808640 19513 + protein coding gene chromobox 1
Tssr104570 11 96789149 to 96789206 57 + TSS region transcription start site region 104570
Tssr104571 11 96789213 to 96789224 11 + TSS region transcription start site region 104571
Tssr104572 11 96789235 to 96789254 19 + TSS region transcription start site region 104572
Gm11517 11 96795439 to 96795825 386 - pseudogene predicted gene 11517
Tssr110347 11 96798600 to 96798636 36 - TSS region transcription start site region 110347
Tssr110348 11 96800806 to 96800868 62 - TSS region transcription start site region 110348
Tssr104573 11 96807685 to 96807719 34 + TSS region transcription start site region 104573
Tssr104574 11 96807792 to 96807802 10 + TSS region transcription start site region 104574