Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96330812-96350970

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(11Hoxb3-Hoxb4)1Karl 11 96318267 to 96347930 29663 cytogenetic marker deletion, Chr 11, Stefan Karlsson 1
Hoxb3 11 96323326 to 96347930 24604 + protein coding gene homeobox B3
Tssr104515 11 96332433 to 96332457 24 + TSS region transcription start site region 104515
Tssr104516 11 96332541 to 96332546 5 + TSS region transcription start site region 104516
Cpgi3651 11 96332624 to 96333525 901 CpG island CpG island 3651
Tssr104517 11 96332817 to 96332840 23 + TSS region transcription start site region 104517
Gm11536 11 96336299 to 96342108 5809 - antisense lncRNA gene predicted gene 11536
Tssr104518 11 96340803 to 96340813 10 + TSS region transcription start site region 104518
Cpgi3652 11 96340812 to 96340970 158 CpG island CpG island 3652
Cpgi3653 11 96341871 to 96342331 460 CpG island CpG island 3653
Hoxb3os 11 96343033 to 96353149 10116 - antisense lncRNA gene homeobox B3 and homeobox B2, opposite strand
Cpgi3654 11 96344051 to 96344615 564 CpG island CpG island 3654
Cpgi3655 11 96345367 to 96346376 1009 CpG island CpG island 3655
Tssr110329 11 96347295 to 96347330 35 - TSS region transcription start site region 110329
Tssr110330 11 96347346 to 96347359 13 - TSS region transcription start site region 110330
Tssr110331 11 96350073 to 96350127 54 - TSS region transcription start site region 110331
Tssr110332 11 96350188 to 96350199 11 - TSS region transcription start site region 110332